| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E2530 |
|---|
| Symbol | |
|---|
| ID | 6269285 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | - |
|---|
| Start bp | 2331947 |
|---|
| End bp | 2333065 |
|---|
| Gene Length | 1119 bp |
|---|
| Protein Length | 372 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641726514 |
|---|
| Product | citrate transporter family protein |
|---|
| Protein accession | YP_001880994 |
|---|
| Protein GI | 187730196 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0471] Di- and tricarboxylate transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTGC CTTTTTTACG CACGCTGCAA GGCGATCGTT TTTTTCAGTT ATTAATTCTT
GTTGGTATCG GATTAAGCTT TTTCGTGCCC TTTGCACCGA AATCCTGGCC TGCTGCTATC
GACTGGCACA CCATCATCAC CTTAAGCGGC CTGATGCTGC TGACCAAAGG TGTGGAGTTA
AGCGGTTATT TTGATGTGCT GGGGCGCAAA ATGGTGCGCC GCTTTGCTAC GGAGCGTCGG
CTGGCGATGT TTATGGTGCT GGCGGCGGCG CTGCTTTCTA CCTTTCTGAC CAACGATGTC
GCGCTGTTTA TTGTTGTTCC GCTGACTATC ACGCTAAAAA GACTGTGTGA GATCCCGGTT
AATCGGCTGA TTATTTTTGA GGCGCTGGCA GTCAATGCTG GTTCGCTACT GACGCCAATT
GGCAACCCGC AAAATATTCT TATCTGGGGA CGTTCTGGTC TTTCGTTTGC CGGATTTATT
GCCCAAATGG CACCGCTGGC TGGCGCAATG ATGCTGACGC TCCTGCTCCT GTGCTGGTGT
TGTTTCCCTG GAAAGGTGCT GCAATACCAT ACGGGGGTGC AAACACCGGA GTGGAAACCG
CGGCTGGTGT GGAGTTGTCT GGGGCTGTAT ATCGTCTTTC TAACGGCGCT GGAGTTCAAA
CAAGAGCTGT GGGGACTGGT GATTGTGGCG GCAGGCTTTG CGCTGCTGGC ACGTCGCGTG
GTGCTCAGTG TGGACTGGAC GCTGCTGCTG GTGTTTATGG CGATGTTTAT CGACGTCCAT
TTACTGACCC AGCTTCCAGC GTTGCAAGGC GTGTTGGGTA ACGTGAGTCA TCTATCTGAA
CCCGGGTTAT GGTTAACGGC AATCGGTTTA TCGCAGGTGA TCAGTAACGT GCCGAGTACC
ATATTGTTGC TGAACTATGT GCCGCCGTCT TTATTACTGG CATGGGCGGT AAACGTAGGT
GGCTTTGGGT TATTACCCGG ATCGCTGGCA AGTTTGATTG CGCTACGTAT GGCGAACGAT
CGCCGCATCT GGTGGCGTTT CCATCTCTAT TCAATACCGA TGCTGTTGTG GGCGGCGTTG
GTGGGATATG TTTTGTTAGT TATACTCCCG GCCAACTAG
|
|---|
| Protein sequence | MSLPFLRTLQ GDRFFQLLIL VGIGLSFFVP FAPKSWPAAI DWHTIITLSG LMLLTKGVEL
SGYFDVLGRK MVRRFATERR LAMFMVLAAA LLSTFLTNDV ALFIVVPLTI TLKRLCEIPV
NRLIIFEALA VNAGSLLTPI GNPQNILIWG RSGLSFAGFI AQMAPLAGAM MLTLLLLCWC
CFPGKVLQYH TGVQTPEWKP RLVWSCLGLY IVFLTALEFK QELWGLVIVA AGFALLARRV
VLSVDWTLLL VFMAMFIDVH LLTQLPALQG VLGNVSHLSE PGLWLTAIGL SQVISNVPST
ILLLNYVPPS LLLAWAVNVG GFGLLPGSLA SLIALRMAND RRIWWRFHLY SIPMLLWAAL
VGYVLLVILP AN
|
|---|
| |