| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E2527 |
|---|
| Symbol | |
|---|
| ID | 6268980 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | + |
|---|
| Start bp | 2327651 |
|---|
| End bp | 2328916 |
|---|
| Gene Length | 1266 bp |
|---|
| Protein Length | 421 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641726511 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001880991 |
|---|
| Protein GI | 187732419 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.00600019 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTCTA CTTTTACCAG CGACACATTG CCAGCCGATC ACAAAGCAGC TATCCGTCAG
ATGAAGCACG CGCTGCGGGC GCAGCTTGGC GACGTCCAGC AGATCTTTAA TCAGCTAAGC
GATGACATTG CCACGCGAGT GGCTGAAATC AACGCACTCA AAGCACAGGG CGATGCCGTC
TGGCCGGTGC TGTCTTATGC CGATATCAAA GCAGGTCATG TTACTGCAGA GCAGCGCGAA
CAGATTAAAC GTCGCGGTTG TGCGGTGATA AAAGGCCATT TCCCCCGCGA ACAAGCGCTA
GGCTGGGATC AGTCGATGCT GGACTATCTG GACCGCAACC GCTTTGACGA GGTCTACAAA
GGCCCCGGCG ATAATTTCTT CGGGACGCTC AGCGCTTCAC GTCCCGAGAT TTACCCCATC
TACTGGTCGC AGACGCAAAT GCAGGCCCGC CAGAGTGAAG AAATGGCGAA TGCGCAGTCG
TTTCTCAATC GTCTGTGGAC ATTTGAAAGT GATGGAAAGC AATGGTTTAA CCCGGATATG
AGCGTCATCT ACCCTGACCG TATCCGCCGC CGTCCGCCCG GAACGACCTC CAAAGGTCTT
GGAGCGCATA CCGACTCCGG GGCGCTGGAA CGCTGGCTGC TTCCAGCGTA TCAGCGCGTT
TTCGCCAACG TCTTTAATGG CAATCTGGCG CAATATGATC CCTGGCATGC GGCACATCGT
ACGGAAGTTG AAGAGTACAC GGTGGACAAC ACCACCAAAT GTTCCGTGTT TCGGACATTC
CAGGGCTGGA CAGCGCTCTC TGATATGCTG CCTGGTCAGG GGTTGCTGCA CGTTGTGCCC
ATTCCTGAAG CCATGGCGTA CGTACTGTTA CGTACGCTGC TTGATGATGT GCCGGAGGAT
GAACTGTGCG GCGTAGCGCC CGGAAGAGTG TTGCCGGTAT CAGAGCAATG GCATCCACTG
TTAATTGAGG CGTTAACCAG CATTCCAAAA CTCGAGGCCG GAGACTCCGT CTGGTGGCAC
TGCGACGTCA TCCATTCCGT TGCCCCCGTT GAAAATCAAC AGGGTTGGGG CAACGTGATG
TACATTCCTG CGGCACCGAT GTGCAAGAAA AATCTTGCCT ACGCGCACAA GGTGAAGGCC
GCACTGGAAA AAGGCGCATC GCCGGGCGAC TTCCCGCGCG AGGACTATGA AACAAACTGG
GAAGGACGCT TTACGCTTGC CGACCTCAAC ATTCACGGTA AGCGAGCGTT GGGCATGGAT
GTTTGA
|
|---|
| Protein sequence | MASTFTSDTL PADHKAAIRQ MKHALRAQLG DVQQIFNQLS DDIATRVAEI NALKAQGDAV
WPVLSYADIK AGHVTAEQRE QIKRRGCAVI KGHFPREQAL GWDQSMLDYL DRNRFDEVYK
GPGDNFFGTL SASRPEIYPI YWSQTQMQAR QSEEMANAQS FLNRLWTFES DGKQWFNPDM
SVIYPDRIRR RPPGTTSKGL GAHTDSGALE RWLLPAYQRV FANVFNGNLA QYDPWHAAHR
TEVEEYTVDN TTKCSVFRTF QGWTALSDML PGQGLLHVVP IPEAMAYVLL RTLLDDVPED
ELCGVAPGRV LPVSEQWHPL LIEALTSIPK LEAGDSVWWH CDVIHSVAPV ENQQGWGNVM
YIPAAPMCKK NLAYAHKVKA ALEKGASPGD FPREDYETNW EGRFTLADLN IHGKRALGMD
V
|
|---|
| |