| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E2517 |
|---|
| Symbol | gsiC |
|---|
| ID | 6271355 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | - |
|---|
| Start bp | 2314825 |
|---|
| End bp | 2315745 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641726501 |
|---|
| Product | glutathione ABC transporter, permease protein GsiC |
|---|
| Protein accession | YP_001880981 |
|---|
| Protein GI | 187732846 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 0.503163 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTAATT ACGTTATCAA ACGCTTACTG GGGTTGATTC CGACGCTGTT TATCGTCTCG
GTGCTGGTGT TTTTATTTGT GCATATGCTG CCCGGCGATC CGGCGCGATT GATTGCCGGG
CCCGAAGCTG ATGCGCAGGT TATAGAACTG GTGCGTCAGC AGCTGGGGTT GGATCAGCCG
CTGTATCACC AGTTCTGGCA CTATATCAGC AATGCTGTGC AGGGGGATTT TGGCCTGTCG
ATGGTGTCGC GTCGTCCGGT TGCCGATGAG ATTGCCAGCC GCTTTATGCC AACGCTGTGG
CTGACCATAA CCAGTATGGT CTGGGCGGTG ATATTTGGTA TGGCGGCGGG AATTATCGCC
GCCGTCTGGC GTAATCGTTG GCCGGATCGA TTGAGTATGA CCATTGCGGT GTCGGGGATC
TCGTTTCCGG CATTTGCGCT GGGGATGCTT TTAATTCAGG TATTCTCCGT TGAACTGGGC
TGGCTGCCTA CCGTGGGAGC AGACAGTTGG CAGCACTACA TTTTATCCTC CCTGACGCTC
GGCGCGGCAG TGGCAGCCGT GATGGCGCGC TTTACCCGCG CGTCGTTTGT CGATGTTTTA
AGCGAAGATT ATATGCGTAC CGCGAGGGCG AAAGGGGTGA GCGAAACCTG GGTTGTCCTC
AAACACGGGC TACGTAACGC GATGATCCCG GTAGTGACCA TGATGGGCTT ACAGTTTGGC
TTTTTGCTCG GTGGTTCTAT CGTGGTGGAG AAAGTTTTCA ACTGGCCCGG ACTTGGACGC
TTACTCGTTG ACTCCGTAGA AATGCGCGAT TACCCGGTGA TTCAGGCGGA AATTCTGCTT
TTCTCGCTGG AATTTATTCT TATCAACTTA GTGGTGGATG TGCTTTACGC CGCCATTAAC
CCGGCTATCA GGTACAAGTA A
|
|---|
| Protein sequence | MLNYVIKRLL GLIPTLFIVS VLVFLFVHML PGDPARLIAG PEADAQVIEL VRQQLGLDQP
LYHQFWHYIS NAVQGDFGLS MVSRRPVADE IASRFMPTLW LTITSMVWAV IFGMAAGIIA
AVWRNRWPDR LSMTIAVSGI SFPAFALGML LIQVFSVELG WLPTVGADSW QHYILSSLTL
GAAVAAVMAR FTRASFVDVL SEDYMRTARA KGVSETWVVL KHGLRNAMIP VVTMMGLQFG
FLLGGSIVVE KVFNWPGLGR LLVDSVEMRD YPVIQAEILL FSLEFILINL VVDVLYAAIN
PAIRYK
|
|---|
| |