| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E2505 |
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| Symbol | deoR |
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| ID | 6271091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 2302721 |
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| End bp | 2303479 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641726492 |
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| Product | DNA-binding transcriptional repressor DeoR |
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| Protein accession | YP_001880972 |
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| Protein GI | 187730630 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAAACAC GTCGCGAAGA GCGTATCGGG CAGCTGCTGC AAGAATTAAA ACGCAGCGAT
AAGTTACATC TTAAAGACGC CGCCGCCCTG CTTGGGGTTT CGGAGATGAC GATTCGTCGC
GATCTGAACA ACCACAGTGC GCCCGTCGTT TTGCTCGGCG GCTATATTGT TCTGGAACCG
CATAGTGCCA GCCATTACCT GTTAAGCGAT CAAAAATCCC GCCTGGTGGA AGAAAAACGC
CGGGCGGCAA AACTGGCTGC GACACTGGTA GAACCCGATC AGACCCTCTT TTTTGACTGT
GGCACCACCA CGCCGTGGAT TATTGAAGCG ATTGATAATG AAATCCCTTT TACCGCCGTT
TGTTATTCGC TAAATACCTT TCTGGCGCTG AAAGAGAAAC CCCATTGCCG CGCATTTCTG
TGCGGTGGTG AATTTCACGC CAGCAACGCC ATTTTCAAAC CCATCGATTT TCAGCAAACG
TTGAATAATT TTTGCCCGGA TATCGCTTTT TATTCCGCGG CGGGCGTGCA TGTCAGTAAA
GGCGCTACCT GTTTTAATCT TGAAGAGTTG CCGGTAAAAC ACTGGGCCAT GTCGATGGCG
CAAAAGCATG TGCTGGTTGT CGACCACAGT AAATTTGGCA AGGTCCGTCC GGCGCGCATG
GGTGACCTGA AACGCTTTGA TATTGTGGTG AGTGATTGTT GCCCGGAAGA TGAGTATGTG
AAGTACGCGC AGACGCACCG TATTAAGTTG ATGTATTAA
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| Protein sequence | METRREERIG QLLQELKRSD KLHLKDAAAL LGVSEMTIRR DLNNHSAPVV LLGGYIVLEP
HSASHYLLSD QKSRLVEEKR RAAKLAATLV EPDQTLFFDC GTTTPWIIEA IDNEIPFTAV
CYSLNTFLAL KEKPHCRAFL CGGEFHASNA IFKPIDFQQT LNNFCPDIAF YSAAGVHVSK
GATCFNLEEL PVKHWAMSMA QKHVLVVDHS KFGKVRPARM GDLKRFDIVV SDCCPEDEYV
KYAQTHRIKL MY
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