Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E2480 |
Symbol | rimK |
ID | 6272473 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 2281626 |
End bp | 2282528 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641726471 |
Product | ribosomal protein S6 modification protein |
Protein accession | YP_001880952 |
Protein GI | 187731842 |
COG category | [H] Coenzyme transport and metabolism [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0189] Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) |
TIGRFAM ID | [TIGR00768] alpha-L-glutamate ligases, RimK family |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAAATTG CCATATTGTC CCGGGATGGA ACGCTCTATT CGTGTAAGCG GCTGCGTGAA GCCGCTATAC AGCGCGGTCA CCTGGTTGAA ATTCTTGATC CGCTTTCTTG CTACATGAAC ATAAATCCTG CGGCGTCTTC TATTCACTAC AAAGGCCGCA AGTTACCCCA TTTTGACGCA GTGATCCCGC GTATTGGCAC CGCCATTACC TTTTATGGGA CGGCGGCACT GCGCCAGTTC GAGATGCTGG GGAGCTATCC GCTCAATGAG TCGGTCGCCA TTGCCCGGGC GCGTGACAAA TTGCGTTCCA TGCAACTGCT GGCGCGTCAG GGCATCGACC TGCCTGTCAC GGGCATTGCG CATTCGCCGG ATGATACCAG CGATTTAATC GACATGGTCG GTGGTGCGCC GCTGGTGGTC AAGTTGGTTG AAGGCACGCA GGGAATTGGC GTCGTGCTGG CGGAGACGCG TCAGGCGGCG GAAAGCGTGA TTGACGCTTT CCGCGGTCTG AACGCGCATA TTCTGGTGCA GGAATATATC AAAGAGGCGC AAGGGTGCGA TATCCGCTGT CTGGTTGTTG GCGATGAAGT GGTCGCTGCG ATTGAACGGC GGGCGAAAGA GGGCGATTTT CGTTCCAATT TGCATCGTGG CGGCGCGGCA AGCGTCGCCA GTATCACACC ACAGGAGCGT GAAATCGCGA TAAAAGCCGC GCGAACGATG GCGCTGGACG TTGCTGGTGT GGATATTCTG CGTGCTAATC GCGGGCCGTT GGTGATGGAA GTGAATGCGT CGCCGGGGCT GGAAGGAATA GAAAAAACCA CTGGTATCGA CATCGCGGGT AAAATGATCC GCTGGATCGA ACGCTACGCT ACGACAGAAT ATTGCCTGAA AACGGGTGGT TAG
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Protein sequence | MKIAILSRDG TLYSCKRLRE AAIQRGHLVE ILDPLSCYMN INPAASSIHY KGRKLPHFDA VIPRIGTAIT FYGTAALRQF EMLGSYPLNE SVAIARARDK LRSMQLLARQ GIDLPVTGIA HSPDDTSDLI DMVGGAPLVV KLVEGTQGIG VVLAETRQAA ESVIDAFRGL NAHILVQEYI KEAQGCDIRC LVVGDEVVAA IERRAKEGDF RSNLHRGGAA SVASITPQER EIAIKAARTM ALDVAGVDIL RANRGPLVME VNASPGLEGI EKTTGIDIAG KMIRWIERYA TTEYCLKTGG
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