| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E2475 |
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| Symbol | potH |
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| ID | 6271975 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | - |
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| Start bp | 2277408 |
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| End bp | 2278361 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641726466 |
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| Product | putrescine transporter subunit: membrane component of ABC superfamily |
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| Protein accession | YP_001880947 |
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| Protein GI | 187732872 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.41505 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATACAC TTGAACCTGC TGCCCAGTCG AAACCGCCGG GCGGATTTAA GCTGTGGTTG
TCGCAGCTGC AAATGAAGCA TGGGCGCAAA CTGGTCATTG CGTTGCCATA TATCTGGTTG
ATCTTGCTGT TTCTGCTGCC ATTTCTGATT GTCTTTAAAA TAAGCCTGGC GGAGATGGCG
CGCGCTATTC CACCTTATAC CGAACTGATG GAGTGGGCTG ACGGGCAACT GTCCATCACT
CTTAATCTCG GTAATTTTCT GCAACTGACC GACGATCCGC TATATTTCGA TGCTTATCTC
CAGTCGCTAC AGGTGGCTGC GATTTCGACA TTTTGCTGTT TACTGATCGG CTATCCGCTG
GCGTGGGCGG TGGCGCACAG TAAGCCTTCG ACCCGTAATA TTTTATTACT ACTGGTGATC
CTGCCGTCGT GGACCTCGTT TCTGATCCGC GTTTATGCCT GGATGGGAAT ATTAAAAAAC
AACGGTGTAC TGAATAATTT TCTGCTGTGG CTGGGGGTTA TCGATCAACC GCTGACCATT
CTTCATACCA ATCTGGCAGT TTATATTGGC ATTGTTTACG CCTACGTGCC GTTTATGGTG
CTGCCGATTT ATACCGCGTT GATTCGTATT GATTATTCGC TAGTGGAAGC AGCGCTGGAT
CTCGGTGCAC GACCGCTGAA AACGTTCTTT ACTGTGATCG TGCCGCTGAC TAAAGGTGGG
ATTATTGCCG GATCGATGCT GGTGTTTATC CCGGCTGTGG GCGAGTTTGT GATCCCGGAA
CTGCTCGGTG GCCCGGACAG CATCATGATC GGGCGCGTGC TATGGCAAGA GTTTTTCAAT
AACCGCGACT GGCCGGTGGC CGCGGCGGTA GCGATCATCA TGTTGCTGCT GCTAATTGTG
CCGATAATGT GGTTCCACAA ACACCAGCAA AAAAGCGTGG GAGAACACGG ATGA
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| Protein sequence | MNTLEPAAQS KPPGGFKLWL SQLQMKHGRK LVIALPYIWL ILLFLLPFLI VFKISLAEMA
RAIPPYTELM EWADGQLSIT LNLGNFLQLT DDPLYFDAYL QSLQVAAIST FCCLLIGYPL
AWAVAHSKPS TRNILLLLVI LPSWTSFLIR VYAWMGILKN NGVLNNFLLW LGVIDQPLTI
LHTNLAVYIG IVYAYVPFMV LPIYTALIRI DYSLVEAALD LGARPLKTFF TVIVPLTKGG
IIAGSMLVFI PAVGEFVIPE LLGGPDSIMI GRVLWQEFFN NRDWPVAAAV AIIMLLLLIV
PIMWFHKHQQ KSVGEHG
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