Gene SbBS512_E2470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E2470 
SymbolartM 
ID6272653 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp2272985 
End bp2273653 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content52% 
IMG OID641726461 
Productarginine transporter permease subunit ArtM 
Protein accessionYP_001880942 
Protein GI187734247 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4160] ABC-type arginine/histidine transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.156065 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGAGT ATTTACCCGA ACTGATGAAA GGGCTACACA CCAGCCTGAC GCTAACCGTT 
GCCTCGCTGA TTGTGGCACT GATTCTGGCA TTGATTTTTA CCATCATCCT GACGCTGAAA
ACGCCGGTGC TGGTGTGGCT GGTGCGGGGT TATATCACGC TGTTTACCGG TACGCCGCTG
CTGGTGCAGA TCTTCCTGAT TTATTACGGG CCGGGCCAGT TTCCGACTTT GCAGGAGTAT
CCGGCACTGT GGCATTTGTT GTCAGAACCG TGGTTATGTG CGCTGATTGC GTTATCGCTG
AACAGTGCGG CGTATACCAC GCAGCTGTTT TACGGTGCAA TTCGTGCGAT CCCAGAAGGT
CAGTGGCAGT CCTGTAGCGC CCTGGGAATG AGCAAAAAAG ATACGCTGGC GATCCTGCTG
CCGTATGCCT TTAAACGCTC GCTCTCTTCT TATTCCAACG AAGTGGTGCT GGTGTTCAAA
AGTACCTCTC TGGCTTACAC CATTACGCTG ATGGAAGTGA TGGGATACAG CCAGTTGTTG
TACGGACGCA CCTACGATGT AATGGTGTTC GGTGCGGCAG GGATTATTTA CCTGGTCGTC
AACGGCCTGC TGACGCTGAT GATGCGTCTG ATCGAGCGCA AAGCACTGGC ATTCGAACGG
CGGAATTAA
 
Protein sequence
MFEYLPELMK GLHTSLTLTV ASLIVALILA LIFTIILTLK TPVLVWLVRG YITLFTGTPL 
LVQIFLIYYG PGQFPTLQEY PALWHLLSEP WLCALIALSL NSAAYTTQLF YGAIRAIPEG
QWQSCSALGM SKKDTLAILL PYAFKRSLSS YSNEVVLVFK STSLAYTITL MEVMGYSQLL
YGRTYDVMVF GAAGIIYLVV NGLLTLMMRL IERKALAFER RN