| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E2461 |
|---|
| Symbol | ltaE |
|---|
| ID | 6272789 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | + |
|---|
| Start bp | 2265225 |
|---|
| End bp | 2266226 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641726452 |
|---|
| Product | L-threonine aldolase |
|---|
| Protein accession | YP_001880933 |
|---|
| Protein GI | 187734078 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2008] Threonine aldolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 0.994155 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTGATT TACGCAGTGA TACCGTTACC CGACCGAGCC GCGCCATGCT CGAAGCGATG
ATGGCCGCCC CGGTTGGGGA CGACGTTTAC GGAGACGACC CTACCGTTAA TGCTCTGCAG
GACTATGCAG CAGAGCTTTC CGGTAAAGAA GCCGCCATTT TTCTGCCTAC CGGCACTCAG
GCCAACCTGG TCGCTCTGCT CAGTCACTGC GAACGTGGCG AAGAGTATAT TGTCGGTCAG
GCCGCGCATA ACTATCTGTT TGAAGCCGGT GGCGCAGCGG TGCTGGGCAG TATTCAGCCG
CACCCCATCG ACGCGGCTGC CGACGGCACG CTACCGCTGG ATAAAGTGGC GATGAAAATC
AAACCCGACG ATATCCATTT CGCCCGCACC AAATTACTCA GTCTGGAAAA CACCCACAAC
GGCAAAGTGC TGCCGCGTGA ATACCTGAAA GAAGCATGGG AATTTACCCG CGAGCGCAAT
CTGGCGCTGC ATGTTGACGG TGCGCGCATC TTTAATGCCG TGGTGGCTTA CGGCTGCGAA
CTGAAAGAGA TCACGCAATA TTGTGATTCG TTCACCATTT GCCTGTCGAA AGGTCTTGGG
ACGCCAGTCG GTTCATTACT CGTCGGTAAT CGTGATTACA TTAAACGTGC CATCCGCTGG
CGGAAAATGG CCGGTGGCGG GATGCGTCAG TCCGGGATTC TGGCTGCCGC CGGGATGTAT
GCCCTGAAAA ATAACGTCGC ACGGTTGCAG GAAGATCACG ACAACGCCGC CTGGATGGCG
GAGCAACTGC GTGAAGCAGG CGCGGATGTG ATGCGTCAGG ACACTAATAT GCTGTTTGTT
CGCGTCGGGG AAGAAAATGC TGCCGCGTTA GGCGAATACA TGAAAGTGAG AAACGTGCTG
ATTAACGCCT CGCCGATTGT CCGCCTGGTG ACGCATCTTG ACGTCTCGCG CGAACAACTG
GCGGAAGTCG CCGCCCACTG GCGCGCATTC CTGGCGCGTT AA
|
|---|
| Protein sequence | MIDLRSDTVT RPSRAMLEAM MAAPVGDDVY GDDPTVNALQ DYAAELSGKE AAIFLPTGTQ
ANLVALLSHC ERGEEYIVGQ AAHNYLFEAG GAAVLGSIQP HPIDAAADGT LPLDKVAMKI
KPDDIHFART KLLSLENTHN GKVLPREYLK EAWEFTRERN LALHVDGARI FNAVVAYGCE
LKEITQYCDS FTICLSKGLG TPVGSLLVGN RDYIKRAIRW RKMAGGGMRQ SGILAAAGMY
ALKNNVARLQ EDHDNAAWMA EQLREAGADV MRQDTNMLFV RVGEENAAAL GEYMKVRNVL
INASPIVRLV THLDVSREQL AEVAAHWRAF LAR
|
|---|
| |