| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E2460 |
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| Symbol | poxB |
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| ID | 6268919 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 2263470 |
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| End bp | 2265188 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641726451 |
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| Product | pyruvate dehydrogenase |
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| Protein accession | YP_001880932 |
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| Protein GI | 187732619 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACAAA CGGTTGCAGC TTATATCGCC AAAACACTCG AATCGGCAGG GGTGAAACGC
ATCTGGGGAG TCACAGGCGA CTCTCTGAAT GGTCTTAGTG ACAGTCTTAA TCGCATGGGC
ACCATCGAGT GGATGTCCAC CCGCCACGAA GAAGTGGCGG CCTTTGCCGC TGGCGCTGAA
GCACAACTTA GCGGAGAACT GGCGGTCTGC GCCGGATCGT GCGGCCCCGG CAACCTGCAC
TTAATCAACG GCCTGTTTGA TTGCCACCGC AATCACGTTC CGGTACTGGC GATTGCCGCT
CATATTCCCT CCAGCGAAAT TGGCAGCGGC TATTTCCAGG AAACCCACCC ACAAGAGCTA
TTCCGCGAAT GTAGTCACTA TTGCGAGCTG GTTTCCAGCC CGGAGCAGAT CCCACAAGTA
CTGGCGATTG CCATGCGCAA AGCGGTGCTT AACCGTGGCG TTTCGGTTGT CGTGTTACCA
GGCGACGTGG CGTTAAAACC TGCGCCAGAA GGGGCAACCA CGCACTGGTA TCATGCGCCA
CAACCAGTCG TGACGCCGGA AGAAGAAGAG TTACGCAAAC TGGCGCAACT GCTGCGTTAT
TCCAGCAATA TCGCCCTGAT GTGTGGCAGC GGCTGCGCGG GGGCGCATAA AGAGTTAGTT
GAGTTTGCCG GGAAAATTAA AGCGCCTATT GTTCATGCCC TGCGCGGTAA AGAACATGTC
GAATACGATA ATCCGTATGA TGTTGGAATG ACCGGGTTAA TCGGCTTCTC GTCAGGTTTC
CATACCATGA TGAACGCCGA CACGTTAGTG CTACTCGGCA CGCAATTTCC CTACCGCGCC
TTCTACCCGA CCGATGCCAA AATCATTCAG ATTGATATCA ACCCAGCCAG CATCGGCGCT
CACAGCAAGG TGGATATGGC ACTGGTCGGC GATATCAAGT CGACTCTGCG TGCATTGCTT
CCATTGGTGG AAGAAAAAGC CGATCGCAAG TTTCTGGATA AAGCGCTGGA AGATTACCGC
GACGCCCGCA AAGGGCTGGA CGATTTAGCT AAACCGAGCG AGAAAGCCAT TCACCCGCAA
TATCTGGCGC AGCAAATTAG TCATTTTGCC GCCGATGACG CTATTTTCAC CTGTGACGTT
GGTACGCCAA CGGTGTGGGC GGCACGTTAT CTAAAAATGA ACGGCAAGCG TCGCCTGTTA
GGTTCGTTTA ACCACGGTTC GATGGCTAAC GCCATGCCGC AGGCGCTGGG TGCGCAGGCG
ACAGAGCCAG AACGTCAGGT GGTCGCCATG TGCGGCGATG GCGGTTTTAG CATGTTGATG
GGCGATTTCC TCTCAGTAGT GCAGATGAAA CTGCCAGTGA AAATTGTCGT CTTTAACAAC
AGCGTGCTGG GCTTTGTGGC GATGGAGATG AAAGCTGGTG GCTATTTGAC TGACGGCACC
GAACTACACG ACACAAACTT TGCCCGCATT GCCGAAGCGT GCGGCATTAC GGGTATCCGT
GTAGAAAAAG CGTCTGAAGT TGATGAAGCC CTGCAACGCG CCTTCTCCAT CGACGGTCCG
GTGCTGGTGG ATGTGGTGGT CGCCAAAGAA GAGTTAGCCA TTCCACCGCA GATCAAACTC
GAACAGGCCA AAGGATTTAG CTTGTATATG TTGCGCGCAA TCATCAGCGG ACGCGGCGAT
GAAGTGATCG AACTGGCGAA AACGAACTGG CTAAGGTAA
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| Protein sequence | MKQTVAAYIA KTLESAGVKR IWGVTGDSLN GLSDSLNRMG TIEWMSTRHE EVAAFAAGAE
AQLSGELAVC AGSCGPGNLH LINGLFDCHR NHVPVLAIAA HIPSSEIGSG YFQETHPQEL
FRECSHYCEL VSSPEQIPQV LAIAMRKAVL NRGVSVVVLP GDVALKPAPE GATTHWYHAP
QPVVTPEEEE LRKLAQLLRY SSNIALMCGS GCAGAHKELV EFAGKIKAPI VHALRGKEHV
EYDNPYDVGM TGLIGFSSGF HTMMNADTLV LLGTQFPYRA FYPTDAKIIQ IDINPASIGA
HSKVDMALVG DIKSTLRALL PLVEEKADRK FLDKALEDYR DARKGLDDLA KPSEKAIHPQ
YLAQQISHFA ADDAIFTCDV GTPTVWAARY LKMNGKRRLL GSFNHGSMAN AMPQALGAQA
TEPERQVVAM CGDGGFSMLM GDFLSVVQMK LPVKIVVFNN SVLGFVAMEM KAGGYLTDGT
ELHDTNFARI AEACGITGIR VEKASEVDEA LQRAFSIDGP VLVDVVVAKE ELAIPPQIKL
EQAKGFSLYM LRAIISGRGD EVIELAKTNW LR
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