| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E2451 |
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| Symbol | macA |
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| ID | 6269439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | - |
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| Start bp | 2253393 |
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| End bp | 2254508 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641726443 |
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| Product | macrolide transporter subunit MacA |
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| Protein accession | YP_001880924 |
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| Protein GI | 187733837 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.00913289 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGC GGAAAACCGT GAAGAAGCGT TACGTTATTG CGCTGGTGAT AGTCATCGCC
GGACTGATTA CGTTATGGAG AATTCTTAAC GCACCCGTGC CGACTTATCA GACACTGATT
GTGCGCCCCG GTGATTTACA GCAAAGCGTG CTGGCGACCG GAAAGCTGGA CGCGCTGCGT
AAGGTTGATG TGGGCGCGCA GGTCAGCGGT CAGTTGAAAA CTCTGTCGGT GGCGATTGGC
GATAAAGTAA AAAAAGACCA GCTTTTAGGG GTTATTGATC CTGAACAGGC TGAAAACCAG
ATTAAGGAGG TCGAAGCAAC GCTGATGGAG CTACGTGCGC AGCGGCAGCA GGCGGAAGCG
GAGCTGAAAC TGGCGCGGGT GACGTATTCC CGTCAGCAAC GTCTGGCACA AACGCAGGCG
GTTTCACAGC AGGATCTCGA CACCGCCGCG ACGGAGATGG CTGTGAAACA GGCGCAAATT
GGCACCATTG ACGCGCAAAT CAAGCGCAAT CAGGCTTCTC TCGATACGGC TAAAACCAAT
CTCGATTACA CTCGCATCGT TGCCCCGATG GCCGGGGAAG TCACGCAAAT CACCACTCTG
CAAGGCCAGA CGGTGATTGC CGCACAACAA GCACCGAACA TTCTGACGCT GGCAGATATG
AGCACCATGC TGGTAAAAGC GCAGGTTTCT GAAGCGGATG TAATCCACCT GAAGCCGGGG
CAAAAAGCTT GGTTTACGGT GCTTGGCGAT CCACTGACGC GCTACGAGGG GCAAATCAAG
GATGTACTAC CGACGCCGGA AAAGGTTAAC GACGCTATTT TCTATTACGC CCGTTTTGAA
GTCCCCAACC CCAATGGTTT GCTGCGGCTG GATATGACTG CGCAAGTGCA TATTCAGCTC
ACCGATGTGA AAAATGTGCT GACGATCCCT CTGTCGGCGT TAGGCGATCC GGTTGGCGAT
AATCGTTATA AAGTCAAATT GTTGCGTAAT GGTGAAACAC GCGAGCGTGA AGTGACGATT
GGCGCACGTA ACGATACCGA TGTTGAGATT GTCAAAGGGC TGGAAGCGGG CGATGAAGTG
GTGATTGGTG AGGCCAAACC AGGAGCTGCA CAATGA
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| Protein sequence | MKKRKTVKKR YVIALVIVIA GLITLWRILN APVPTYQTLI VRPGDLQQSV LATGKLDALR
KVDVGAQVSG QLKTLSVAIG DKVKKDQLLG VIDPEQAENQ IKEVEATLME LRAQRQQAEA
ELKLARVTYS RQQRLAQTQA VSQQDLDTAA TEMAVKQAQI GTIDAQIKRN QASLDTAKTN
LDYTRIVAPM AGEVTQITTL QGQTVIAAQQ APNILTLADM STMLVKAQVS EADVIHLKPG
QKAWFTVLGD PLTRYEGQIK DVLPTPEKVN DAIFYYARFE VPNPNGLLRL DMTAQVHIQL
TDVKNVLTIP LSALGDPVGD NRYKVKLLRN GETREREVTI GARNDTDVEI VKGLEAGDEV
VIGEAKPGAA Q
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