| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E2447 |
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| Symbol | clpA |
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| ID | 6270181 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | - |
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| Start bp | 2248203 |
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| End bp | 2250479 |
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| Gene Length | 2277 bp |
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| Protein Length | 758 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641726439 |
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| Product | ATP-dependent Clp protease ATP-binding subunit |
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| Protein accession | YP_001880920 |
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| Protein GI | 187730565 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR02639] ATP-dependent Clp protease ATP-binding subunit clpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0676288 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCAATC AAGAACTGGA ACTCAGTTTA AATATGGCTT TCGCCAGAGC GCGCGAGCAC
CGTCATGAGT TTATGACCGT CGAGCACTTG TTACTGGCGC TGCTCAGTAA CCCATCTGCC
CGGGAGGCGC TGGAAGCGTG TTCTGTGGAT TTGGTTGCGC TCTGTCAGGA ACTGGAAGCC
TTTATTGAAC AAACCACACC CGTTCTGCCT GCCAGTGAAG AGGAGCGCGA CACACAGCCG
ACGCTGAGTT TTCAGCGTGT ACTGCAACGT GCGGTCTTCC ATGTCCAGTC CTCCGGTCGC
AATGAGGTAA CCGGTGCAAA CGTTCTGGTC GCTATCTTTA GCGAACAGGA GTCGCAGGCG
GCATATCTGT TGCGTAAACA TGAAGTCAGC CGTCTCGATG TGGTGAACTT TATCTCTCAT
GGCACGCGTA AAGACGAGCC GACACAGTCT TCTGATCCTG GCAGCCAGCC AAACAGCGAA
GAACAAGCTG GTGGGGAGGA ACGTATGGAG AATTTCACGA CGAACCTGAA TCAGCTTGCG
CGCGTGGGCG GAATCGACCC ACTGATTGGT CGTGAGAAGG AGCTGGAGCG TGCTATTCAG
GTTCTCTGCC GTCGCCGTAA AAACAACCCG CTGCTGGTGG GGGAATCTGG TGTCGGTAAA
ACCGCGATTG CGGAAGGTCT TGCCTGGCGA ATTGTTCAGG GCGATGTGCC GGAAGTGATG
GCTGACTGTA CGATTTACTC TCTCGATATC GGTTCTCTGT TAGCGGGCAC TAAATATCGC
GGCGACTTTG AAAAACGTTT TAAAGCGTTG CTCAAGCAGC TGGAGCAGGA CACTAACAGC
ATCCTGTTTA TTGATGAGAT CCACACCATT ATCGGTGCGG GTGCAGCGTC TGGTGGCCAG
GTCGATGCGG CTAACCTGAT CAAACCGTTG CTCTCCAGCG GTAAAATTCG CGTAATTGGT
TCGACAACCT ATCAGGAGTT CAGCAACATT TTCGAGAAAG ACCGTGCTCT GGCGCGTCGC
TTCCAGAAAA TTGATATTAC TGAACCGTCG ATCGAAGAAA CTGTTCAAAT CATCAATGGC
CTGAAACCGA AGTATGAAGC GCACCACGAC GTGCGTTATA CTGCAAAAGC GGTGCGTGCA
GCGGTAGAGC TGGCGGTGAA ATACATTAAC GATCGTCATC TGCCGGATAA AGCCATTGAC
GTTATCGACG AAGCGGGCGC TCGCGCACGC CTGATGCCGG TAAGCAAACG CAAGAAAACC
GTTAATGTGG CGGATATTGA GTCCGTGGTG GCCCGTATTG CGCGCATTCC AGAGAAGAGT
GTTTCTCAGA GTGACCGCGA TACCCTGAAA AACCTCGGCG ATCGCCTGAA AATGCTGGTC
TTCGGTCAGG ATAAAGCCAT TGAGGCGCTG ACTGAAGCCA TTAAGATGGC GCGTGCAGGT
TTAGGTCACG AACATAAACC GGTTGGTTCG TTCCTGTTTG CCGGCCCTAC CGGGGTCGGG
AAAACAGAGG TGACGGTACA GCTTTCGAAA GCGTTGGGCA TTGAGCTGCT GCGCTTTGAT
ATGTCCGAGT ATATGGAACG CCATACCGTC AGCCGTCTGA TTGGTGCGCC TCCGGGATAC
GTTGGTTTTG ATCAGGGAGG TTTGCTGACT GATGCGGTCA TCAAGTATCC ACATGCGGTG
CTGTTGCTGG ACGAAATCGA GAAAGCGCAT CCGGACGTGT TCAATATTCT GTTGCAGGTG
ATGGACAACG GTACGCTGAC CGATAACAAC GGACGCAAAG CGGACTTCCG TAACGTGGTG
CTGGTGATGA CCACCAACGC CGGGGTACGT GAAACTGAGC GTAAATCCAT TGGTCTTATC
CACCAGGATA ACAGCACCGA TGCGATGGAA GAGATCAAGA AGATCTTTAC ACCGGAATTC
CGTAACCGTC TCGACAACAT TATCTGGTTC GATCATCTGT CAACTGACGT GATCCATCAG
GTGGTGGATA AATTCATCGT CGAGTTGCAG GTTCAGCTGG ATCAGAAAGG TGTTTCTCTG
GAAGTGAGCC AGGAAGCGCG TAACTGGCTG GCCGAGAAAG GTTACGACCG GGCAATGGGC
GCACGTCCGA TGGCGCGTGT CATCCAGGAC AACCTGAAAA AACCGCTCGC CAACGAACTG
CTGTTTGGTT CGCTGGTGGA CGGCGGTCAG GTCACCGTCG AGCTGGATAA AGAGAAAAAT
GAGCTGACTT ACGGATTCCA GAGTGCACAA AAGCACAAGG CGGAAGCAGC GCATTAA
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| Protein sequence | MLNQELELSL NMAFARAREH RHEFMTVEHL LLALLSNPSA REALEACSVD LVALCQELEA
FIEQTTPVLP ASEEERDTQP TLSFQRVLQR AVFHVQSSGR NEVTGANVLV AIFSEQESQA
AYLLRKHEVS RLDVVNFISH GTRKDEPTQS SDPGSQPNSE EQAGGEERME NFTTNLNQLA
RVGGIDPLIG REKELERAIQ VLCRRRKNNP LLVGESGVGK TAIAEGLAWR IVQGDVPEVM
ADCTIYSLDI GSLLAGTKYR GDFEKRFKAL LKQLEQDTNS ILFIDEIHTI IGAGAASGGQ
VDAANLIKPL LSSGKIRVIG STTYQEFSNI FEKDRALARR FQKIDITEPS IEETVQIING
LKPKYEAHHD VRYTAKAVRA AVELAVKYIN DRHLPDKAID VIDEAGARAR LMPVSKRKKT
VNVADIESVV ARIARIPEKS VSQSDRDTLK NLGDRLKMLV FGQDKAIEAL TEAIKMARAG
LGHEHKPVGS FLFAGPTGVG KTEVTVQLSK ALGIELLRFD MSEYMERHTV SRLIGAPPGY
VGFDQGGLLT DAVIKYPHAV LLLDEIEKAH PDVFNILLQV MDNGTLTDNN GRKADFRNVV
LVMTTNAGVR ETERKSIGLI HQDNSTDAME EIKKIFTPEF RNRLDNIIWF DHLSTDVIHQ
VVDKFIVELQ VQLDQKGVSL EVSQEARNWL AEKGYDRAMG ARPMARVIQD NLKKPLANEL
LFGSLVDGGQ VTVELDKEKN ELTYGFQSAQ KHKAEAAH
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