Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E2429 |
Symbol | |
ID | 6269937 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 2227197 |
End bp | 2228036 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641726423 |
Product | IS911, transposase orfB |
Protein accession | YP_001880905 |
Protein GI | 187732506 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.275532 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGTCACAC TCTGCCAAGT GTTCGGGGTT CATCGCAGCA GCTACAGATA CTGGAAAAAC CGTCCTGAAA AACCAGACGG CAGACGGGCT GTATTACGCA GTCAGGTACT TGAGCTACAT GGCATCAGCC ATGGTTCGGC CGGAGCAAGA AGCATCGCCA CAATGGCAAC CCGGAGAGGC TACCAGATGG GACGCTGGCT TGCTGGCAGG CTCATGAAAG AGCTGGGGCT GGTCAGCTGT CAGCAGCCGA CTCACCGGTA TAAACGTGGT GGTCATGAAC ATGTTGCTAT CCCTAACTAC CTTGAAAGGC AGTTCGCCGT GACCGAGCCA AATCAGGTGT GGTGCGGTGA TGTGACCTGT ATCTGGACGG GTAAGCGCTG GGCGTACCTC GCCGTTGTTC TCGACCTGTT CGCAAGAAAA CCAGTGGGCT GGGCCATGTC GTTCTCGCCG GACAGCAGGC TCACCATGAA AGCGCTGGAA ATGGCATGGG AAACCCGTGG TAAGCCCGGC GGGGTGATGT TCCACAGCGA TCAGGGCAGT CATTATACGA GCAGGCAGTT CCGGCAGTTA TTGTGGCGAT ACCAGATCAG ACAGAGTATG AGCCGGCGCG GAAACTGCTG GGATAACAGC CCAATGGAAC GCTTCTTCAG GAGTCTGAAG AACGAATGGA TGCCGGTGGT GGGTTACGTA AGCTTCAGCG AGGCAGCTCA CGCCATAACG GACTATATCG TTGGATATTA CAGCGCACTA AGACCGCACG AATATAACGG TGGGTTACCC CCAAACGAAT CGGAAAATCG ATACTGGAAA AACTCTAACT CGGTGGCCAG TTTTTGTTGA
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Protein sequence | MVTLCQVFGV HRSSYRYWKN RPEKPDGRRA VLRSQVLELH GISHGSAGAR SIATMATRRG YQMGRWLAGR LMKELGLVSC QQPTHRYKRG GHEHVAIPNY LERQFAVTEP NQVWCGDVTC IWTGKRWAYL AVVLDLFARK PVGWAMSFSP DSRLTMKALE MAWETRGKPG GVMFHSDQGS HYTSRQFRQL LWRYQIRQSM SRRGNCWDNS PMERFFRSLK NEWMPVVGYV SFSEAAHAIT DYIVGYYSAL RPHEYNGGLP PNESENRYWK NSNSVASFC
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