Gene SbBS512_E2429 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E2429 
Symbol 
ID6269937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp2227197 
End bp2228036 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content55% 
IMG OID641726423 
ProductIS911, transposase orfB 
Protein accessionYP_001880905 
Protein GI187732506 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.275532 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTCACAC TCTGCCAAGT GTTCGGGGTT CATCGCAGCA GCTACAGATA CTGGAAAAAC 
CGTCCTGAAA AACCAGACGG CAGACGGGCT GTATTACGCA GTCAGGTACT TGAGCTACAT
GGCATCAGCC ATGGTTCGGC CGGAGCAAGA AGCATCGCCA CAATGGCAAC CCGGAGAGGC
TACCAGATGG GACGCTGGCT TGCTGGCAGG CTCATGAAAG AGCTGGGGCT GGTCAGCTGT
CAGCAGCCGA CTCACCGGTA TAAACGTGGT GGTCATGAAC ATGTTGCTAT CCCTAACTAC
CTTGAAAGGC AGTTCGCCGT GACCGAGCCA AATCAGGTGT GGTGCGGTGA TGTGACCTGT
ATCTGGACGG GTAAGCGCTG GGCGTACCTC GCCGTTGTTC TCGACCTGTT CGCAAGAAAA
CCAGTGGGCT GGGCCATGTC GTTCTCGCCG GACAGCAGGC TCACCATGAA AGCGCTGGAA
ATGGCATGGG AAACCCGTGG TAAGCCCGGC GGGGTGATGT TCCACAGCGA TCAGGGCAGT
CATTATACGA GCAGGCAGTT CCGGCAGTTA TTGTGGCGAT ACCAGATCAG ACAGAGTATG
AGCCGGCGCG GAAACTGCTG GGATAACAGC CCAATGGAAC GCTTCTTCAG GAGTCTGAAG
AACGAATGGA TGCCGGTGGT GGGTTACGTA AGCTTCAGCG AGGCAGCTCA CGCCATAACG
GACTATATCG TTGGATATTA CAGCGCACTA AGACCGCACG AATATAACGG TGGGTTACCC
CCAAACGAAT CGGAAAATCG ATACTGGAAA AACTCTAACT CGGTGGCCAG TTTTTGTTGA
 
Protein sequence
MVTLCQVFGV HRSSYRYWKN RPEKPDGRRA VLRSQVLELH GISHGSAGAR SIATMATRRG 
YQMGRWLAGR LMKELGLVSC QQPTHRYKRG GHEHVAIPNY LERQFAVTEP NQVWCGDVTC
IWTGKRWAYL AVVLDLFARK PVGWAMSFSP DSRLTMKALE MAWETRGKPG GVMFHSDQGS
HYTSRQFRQL LWRYQIRQSM SRRGNCWDNS PMERFFRSLK NEWMPVVGYV SFSEAAHAIT
DYIVGYYSAL RPHEYNGGLP PNESENRYWK NSNSVASFC