| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E2425 |
|---|
| Symbol | pflB2 |
|---|
| ID | 6270535 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | + |
|---|
| Start bp | 2222905 |
|---|
| End bp | 2225187 |
|---|
| Gene Length | 2283 bp |
|---|
| Protein Length | 760 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641726420 |
|---|
| Product | formate acetyltransferase |
|---|
| Protein accession | YP_001880902 |
|---|
| Protein GI | 187733224 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1882] Pyruvate-formate lyase |
|---|
| TIGRFAM ID | [TIGR01255] formate acetyltransferase 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.341931 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGAGC TTAATGAAAA GTTAGCCACA GCCTGGGAAG GTTTTACCAA AGGTGACTGG
CAGAATGAAG TAAACGTCCG TGACTTCATT CAGAAAAACT ACACTCCGTA CGAGGGTGAC
GAGTCCTTCC TAGCTGGCGC TACTGAAGCG ACCACCACCC TGTGGGACAA AGTAATGGAA
GGCGTTAAAC TGGAAAACCG CACTCACGCG CCAGTTGACT TTGACACCGC TGTTGCTTCC
ACCATCACCT CTCACGACGC AGGCTACATC AACAAGCAGC TTGAGAAAAT CGTTGGTCTG
CAGACTGAAG CTCCGCTGAA ACGTGCTCTT ATCCCGTTCG GTGGTATCAA AATGATCGAA
GGTTCCTGCA AAGCGTACAA CCGCGAACTG GATCCGATGA TCAAAAAAAT CTTCACTGAA
TACCGTAAAA CTCACAACCA GGGCGTGTTC GACGTTTACA CTCCGGACAT CCTGCGTTGC
CGTAAATCTG GTGTTCTGAC CGGTCTGCCA GATGCATATG GCCGTGGCCG TATCATCGGT
GACTACCGTC GCGTTGCGCT GTACGGTATC GACTACCTGA TGAAAGACAA ACTGGCACAG
TTCACTTCTC TGCAGGCTGA TCTGGAAAAC GGCGTAAACC TGGAACAGAC TATCCGTCTG
CGCGAAGAAA TCGCTGAACA GCACCGCGCT CTGGGTCAGA TGAAAGAAAT GGCTGCGAAA
TACGGCTACG ACATCTCTGG TCCGGCTACC AACGCTCAGG AAGCTATCCA GTGGACTTAC
TTCGGCTACC TGGCTGCTGT TAAGTCTCAG AACGGTGCTG CAATGTCCTT CGGTCGTACC
TCCACCTTCC TGGATGTGTA CATCGAACGT GACCTGAAAG CTGGCAAGAT CACCGAACAA
GAAGCGCAGG AAATGGTTGA CCACCTGGTC ATGAAACTGC GTATGGTTCG CTTCCTGCGT
ACTCCGGAAT ACGATGAACT GTTCTCTGGC GACCCGATCT GGGCAACCGA ATCTATCGGT
GGTATGGGCC TCGACGGTCG TACCCTGGTT ACCAAAAACA GCTTCCGTTT CCTGAACACC
CTGTACACCA TGGGTCCGTC TCCGGAACCG AACATGACCA TTCTGTGGTC TGAAAAACTG
CCGCTGAACT TCAAGAAATT CGCCGCTAAA GTGTCCATCG ACACCTCTTC TCTGCAGTAT
GAGAACGATG ACCTGATGCG TCCGGACTTC AACAACGATG ACTATGCTAT CGCTTGCTGC
GTAAGCCCGA TGATCGTTGG TAAACAAATG CAGTTCTTCG GTGCGCGTGC AAACCTGGCG
AAAACCATGC TGTACGCAAT CAACGGCGGC GTTGACGAAA AACTGAAAAT GCAGGTTGGT
CCGAAGTCTG AACCGATCAA AGGCGATCTC CTGAACTACG ATGAAGTGAT GGAGCGCATG
GATCACTTCA TGGACTGGCT GGCTAAACAG TACATCACTG CACTGAACAT CATCCACTAC
ATGCACGACA AGTACAGCTA CGAAGCCTCT CTGATGGCGC TGCACGACCG TGACGTTATC
CGCACCATGG CGTGTGGTAT CGCTGGTCTG TCCGTTGCTG CTGACTCCCT GTCTGCAATC
AAATATGCGA AAGTTAAACC GATTCGTGAC GAAGACGGTC TGGCTATCGA CTTCGAAATC
GAAGGCGAAT ACCCGCAGTT TGGTAACAAT GATCCGCGTG TAGATGACCT GGCTGTTGAC
CTGGTAGAAC GTTTCATGAA GAAAATTCAG AAACTGCACA CCTACCGTGA CGCTATCCCG
ACTCAGTCTG TTCTGACCAT CACTTCTAAC GTTGTGTATG GTAAGAAAAC TGGTAACACC
CCAGACGGTC GTCGTGCTGG CGCGCCGTTC GGACCGGGTG CTAACCCGAT GCACGGTCGT
GACCAGAAAG GTGCTGTAGC GTCTCTGACT TCCGTTGCTA AACTGCCGTT TGCTTACGCT
AAAGATGGTA TCTCCTACAC CTTCTCTATC GTTCCGAACG CACTGGGTAA AGACGACGAA
GTTCGTAAGA CCAACCTGGC TGGTCTGATG GATGGTTACT TCCACCACGA AGCATCCATC
GAAGGTGGTC AGCACCTGAA CGTTAACGTG ATGAACCGTG AAATGCTGCT CGACGCGATG
GAAAACCCGG AAAAATATCC GCAGCTGACC ATCCGTGTAT CTGGCTACGC AGTACGTTTC
AACTCGCTGA CTAAAGAACA GCAGCAGGAC GTTATTACTC GTACCTTCAC TCAATCTATG
TAA
|
|---|
| Protein sequence | MSELNEKLAT AWEGFTKGDW QNEVNVRDFI QKNYTPYEGD ESFLAGATEA TTTLWDKVME
GVKLENRTHA PVDFDTAVAS TITSHDAGYI NKQLEKIVGL QTEAPLKRAL IPFGGIKMIE
GSCKAYNREL DPMIKKIFTE YRKTHNQGVF DVYTPDILRC RKSGVLTGLP DAYGRGRIIG
DYRRVALYGI DYLMKDKLAQ FTSLQADLEN GVNLEQTIRL REEIAEQHRA LGQMKEMAAK
YGYDISGPAT NAQEAIQWTY FGYLAAVKSQ NGAAMSFGRT STFLDVYIER DLKAGKITEQ
EAQEMVDHLV MKLRMVRFLR TPEYDELFSG DPIWATESIG GMGLDGRTLV TKNSFRFLNT
LYTMGPSPEP NMTILWSEKL PLNFKKFAAK VSIDTSSLQY ENDDLMRPDF NNDDYAIACC
VSPMIVGKQM QFFGARANLA KTMLYAINGG VDEKLKMQVG PKSEPIKGDL LNYDEVMERM
DHFMDWLAKQ YITALNIIHY MHDKYSYEAS LMALHDRDVI RTMACGIAGL SVAADSLSAI
KYAKVKPIRD EDGLAIDFEI EGEYPQFGNN DPRVDDLAVD LVERFMKKIQ KLHTYRDAIP
TQSVLTITSN VVYGKKTGNT PDGRRAGAPF GPGANPMHGR DQKGAVASLT SVAKLPFAYA
KDGISYTFSI VPNALGKDDE VRKTNLAGLM DGYFHHEASI EGGQHLNVNV MNREMLLDAM
ENPEKYPQLT IRVSGYAVRF NSLTKEQQQD VITRTFTQSM
|
|---|
| |