Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E2424 |
Symbol | |
ID | 6268537 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 2221993 |
End bp | 2222850 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641726419 |
Product | formate transporter |
Protein accession | YP_001880901 |
Protein GI | 187730628 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2116] Formate/nitrite family of transporters |
TIGRFAM ID | [TIGR00790] formate/nitrite transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.307423 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAAGCTG ACAACCCTTT TGATCTTTTA CTTCCTGCTG CAATGGCCAA AGTGGCCGAA GAGGCGGGTG TCTATAAAGC AACGAAACAT CCGCTTAAGA CTTTCTATCT GGCGATTACC GCCGGTGTTT TCATCTCAAT CGCATTCGTC TTCTATATCA CAGCAACCAC TGGCACAGGC ACAATGCCCT TCGGCATGGC AAAACTGGTT GGCGGCATTT GCTTCTCTCT GGGGCTGATT CTTTGTGTTG TCTGCGGAGC CGATCTCTTT ACTTCCACCG TGTTGATTGT TGTTGCTAAG GCGAGTGGGC GCATCACCTG GGGTCAGTTG GCGAAAAACT GGCTAAATGT CTATTTTGGC AACCTGGTCG GCGCACTGCT GTTTGTACTT TTAATGTGGC TTTCCGGCGA GTATATGACC GCAAATGGTC AATGGGGACT AAACGTCCTA CAAACCGCCG ACCACAAAGT GCACCATACT TTTATTGAGG CCGTCTGTCT TGGTATCCTG GCAAACCTGA TGGTATGTCT GGCAGTATGG ATGAGTTATT CTGGCCGCAG CCTGATGGAC AAAGCGTTCA TTATGGTGCT GCCGGTCGCG ATGTTTGTTG CCAGCGGTTT TGAGCACAGT ATCGCAAACA TGTTTATGAT CCCGATGGGT ATTGTAATCC GCGACTTCGC ATCTCCGGAA TTCTGGACCG CTGTCGGTTC TGCACCGGAA AATTTTTCTC ACCTGACCGT GATGAACTTC ATCACTGATA ACCTGATCCC GGTTACGATC GGTAATATTA TCGGCGGTGG TTTGTTGGTT GGGTTGACAT ACTGGGTCAT TTACCTGCGT GAAAACGATC ACCATTAA
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Protein sequence | MKADNPFDLL LPAAMAKVAE EAGVYKATKH PLKTFYLAIT AGVFISIAFV FYITATTGTG TMPFGMAKLV GGICFSLGLI LCVVCGADLF TSTVLIVVAK ASGRITWGQL AKNWLNVYFG NLVGALLFVL LMWLSGEYMT ANGQWGLNVL QTADHKVHHT FIEAVCLGIL ANLMVCLAVW MSYSGRSLMD KAFIMVLPVA MFVASGFEHS IANMFMIPMG IVIRDFASPE FWTAVGSAPE NFSHLTVMNF ITDNLIPVTI GNIIGGGLLV GLTYWVIYLR ENDHH
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