Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E2422 |
Symbol | |
ID | 6271328 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 2219005 |
End bp | 2219697 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641726417 |
Product | hypothetical protein |
Protein accession | YP_001880899 |
Protein GI | 187731826 |
COG category | [S] Function unknown |
COG ID | [COG2323] Predicted membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.000473983 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGGCGT TCGATCTCCA CCGTATGGCA TTTGATAAAG TGCCTTTTGA TTTCCTTGGC GAAGTTGCAC TACGTAGTCT TTATACCTTT GTACTGGTTT TTTTGTTCCT CAAAATGACC GGAAGACGCG GTGTGCGACA GATGTCGCTG TTTGAAGTGT TAATCATTCT CACGCTGGGT TCAGCGGCGG GAGATGTGGC GTTTTATGAT GATGTGCCGA TGGTGCCGGT ACTTATCGTC TTTATCACTC TGGCGTTGTT ATACCGCCTG GTAATGTGGT TGATGGCGCA CAGTGAAAAA CTGGAAGATC TACTGGAAGG TAAGCCGGTT GTTATTATTG AAGATGGCGA GCTGGCCTGG TCGAAACTCA ATAACTCCAA CATGACGGAA TTTGAGTTCT TTATGGAGCT ACGATTGCGT GGCGTGGAGC AGCTGGGGCA GGTACGTCTG GCGATTCTCG AAACCAACGG GCAAATCAGT GTCTATTTCT TTGAAGATGA CAAGGTGAAA CCGGGTTTAC TTATTTTACC CAGTGATTGT ACGCAGCGTT ACAAAGTGGT GCCGGAGTCG GCGGACTATG CCTGTATTCG TTGTAGTGAA ATCATTCATA TGAAAGCGGG GGAAAAACAA TTATGTCCGC GCTGTGCAAA TCCAGAATGG ACGAAGGCAA GTCGGGCAAA ACGGGTGACC TGA
|
Protein sequence | MKAFDLHRMA FDKVPFDFLG EVALRSLYTF VLVFLFLKMT GRRGVRQMSL FEVLIILTLG SAAGDVAFYD DVPMVPVLIV FITLALLYRL VMWLMAHSEK LEDLLEGKPV VIIEDGELAW SKLNNSNMTE FEFFMELRLR GVEQLGQVRL AILETNGQIS VYFFEDDKVK PGLLILPSDC TQRYKVVPES ADYACIRCSE IIHMKAGEKQ LCPRCANPEW TKASRAKRVT
|
| |