Gene SbBS512_E2421 details

Gene Information

• Locus tag: SbBS512_E2421
• Symbol: serC
• ID: 6269286
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: -
• Start bp: 2217718
• End bp: 2218806
• Gene Length: 1089 bp
• Protein Length: 362 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 641726416
• Product: phosphoserine aminotransferase
• Protein accession: YP_001880898
• Protein GI: 187731331
• COG category: [E] Amino acid transport and metabolism; [H] Coenzyme transport and metabolism
• COG ID: [COG1932] Phosphoserine aminotransferase
• TIGRFAM ID: [TIGR01364] phosphoserine aminotransferase

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.000598679
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTCAAA TCTTCAATTT TAGTTCTGGT CCGGCAATGC TACCGGCAGA GGTGCTTAAA 
CAGGCTCAAC AGGAACTGCG CGACTGGAAC GGTCTTGGTA CGTCGGTGAT GGAAGTGAGT 
CACCGTGGCA AAGAGTTCAT TCAGGTTGCA GAGGAAGCCG AGAAGGATTT TCGCGATCTT 
CTTAATGTCC CCTCCAACTA CAAGGTATTA TTCTGCCATG GCGGTGGTCG CGGTCAGTTT 
GCTGCGGTAC CGCTGAATAT TCTCGGTGAT AAAACCACCG CAGATTATGT TGATGCCGGT 
TACTGGGCGG CAACTGCCAT TAAAGAAGCG AAAAAATACT GCACGCCTAA TGTCTTTGAC 
GCCAAAGTGA CTGTTGATGG TCTGCGCGCG GTTAAGCCAA TGCGTGAATG GCAACTCTCT 
GATAATGCTG CTTATATGCA TTACTGCCCG AATGAAACCA TCGACGGTAT CGCCATCGAC 
GAAACGCCAG ACTTCGGCAA AGATGTGGTG GTCGCCGCCG ACTTCTCTTC AACCATTCTT 
TCCCGTCCGA TTGACGTCAG CCGTTATGGC GTGATTTACG CTGGCGCGCA GAAAAATATC 
GGCCCGGCTG GCCTGACAAT CGTCATCGTT CGTGAAGATT TGCTGGGCAA AGCGAATATC 
GCGTGTCCGT CGATACTGGA TTATTCCATC TTCAACGATA ACGGCTCCAT GTTTAACACG 
CCGCCGACAT TTGCCTGGTA TCTATCTGGT CTGGTCTTTA AATGGCTGAA AGCGAACGGC 
GGTGTAGCTG AAATGGATAA AATCAATCAG CAAAAAGCAG AACTGCTATA TGGGGTGATT 
GATAACAGCG ATTTCTACCG CAATGACGTG GCGAAAGCTA ACCGTTCGCG GATGAACGTG 
CCGTTCCAGT TGGCGGACAG TGCGCTTGAC AAATTGTTCC TTGAAGAGTC TTTTGCTGCT 
GGCCTTCATG CACTGAAAGG TCACCGTGTG GTCGGCGGAA TGCGCGCTTC TATTTATAAC 
GCCATGCCGC TGGAAGGCGT TAAAGCGCTG ACAGACTTCA TGGTTGAGTT CGAACGCCGT 
CACGGTTAA 

 

Protein sequence

MAQIFNFSSG PAMLPAEVLK QAQQELRDWN GLGTSVMEVS HRGKEFIQVA EEAEKDFRDL 
LNVPSNYKVL FCHGGGRGQF AAVPLNILGD KTTADYVDAG YWAATAIKEA KKYCTPNVFD 
AKVTVDGLRA VKPMREWQLS DNAAYMHYCP NETIDGIAID ETPDFGKDVV VAADFSSTIL 
SRPIDVSRYG VIYAGAQKNI GPAGLTIVIV REDLLGKANI ACPSILDYSI FNDNGSMFNT 
PPTFAWYLSG LVFKWLKANG GVAEMDKINQ QKAELLYGVI DNSDFYRNDV AKANRSRMNV 
PFQLADSALD KLFLEESFAA GLHALKGHRV VGGMRASIYN AMPLEGVKAL TDFMVEFERR 
HG