| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E2417 |
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| Symbol | rpsA |
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| ID | 6269041 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | - |
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| Start bp | 2212792 |
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| End bp | 2214465 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641726412 |
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| Product | 30S ribosomal protein S1 |
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| Protein accession | YP_001880894 |
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| Protein GI | 187733119 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000000560944 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGAAT CTTTTGCTCA ACTCTTTGAA GAGTCCTTAA AAGAAATCGA AACCCGCCCG
GGTTCTATCG TTCGTGGCGT TGTTGTTGCT ATCGACAAAG ACGTAGTACT GGTTGACGCT
GGTCTGAAAT CTGAGTCCGC CATCCCGGCT GAGCAGTTCA AAAACGCCCA GGGCGAGCTG
GAAATCCAGG TAGGTGACGA AGTTGACGTT GCTCTGGACG CAGTAGAAGA CGGCTTCGGT
GAAACTCTGC TGTCCCGTGA GAAAGCTAAA CGTCACGAAG CCTGGATCAC GCTGGAAAAA
GCTTACGAAG ATGCTGAAAC TGTTACCGGT GTTATCAACG GCAAAGTTAA GGGCGGCTTC
ACTGTTGAGC TGAACGGTAT TCGTGCGTTC CTGCCAGGTT CTCTGGTAGA CGTTCGTCCG
GTGCGTGACA CTCTGCACCT GGAAGGCAAA GAGCTTGAAT TTAAAGTAAT CAAGCTGGAT
CAGAAGCGCA ACAACGTTGT TGTTTCTCGT CGTGCCGTTA TCGAATCCGA AAACAGCGCA
GAGCGCGATC AGCTGCTGGA AAACCTGCAG GAAGGCATGG AAGTTAAAGG TATCGTTAAG
AACCTCACTG ACTACGGTGC ATTCGTTGAT CTGGGCGGCG TTGACGGCCT GCTGCACATC
ACTGACATGG CCTGGAAACG CGTTAAGCAT CCGAGCGAAA TCGTCAACGT GGGCGACGAA
ATCACTGTTA AAGTGCTGAA GTTCGACCGC GAACGTACCC GTGTATCCCT GGGCCTGAAA
CAGTTGGGCG AAGATCCGTG GGTAGCTATC GCTAAACGTT ATCCGGAAGG TACCAAACTG
ACTGGTCGCG TGACCAACCT GACCGACTAC GGCTGCTTCG TTGAAATCGA AGAAGGCGTT
GAAGGCCTGG TACACGTTTC CGAAATGGAT TGGACCAACA AAAACATCCA CCCGTCCAAA
GTTGTTAACG TTGGCGATGT AGTGGAAGTT ATGGTTCTGG ATATCGACGA AGAACGTCGT
CGTATCTCCC TGGGTCTGAA ACAGTGCAAA GCTAACCCGT GGCAGCAGTT CGCGGAAACC
CACAACAAGG GCGACCGTGT TGAAGGTAAA ATCAAGTCTA TCACTGACTT CGGTATCTTC
ATCGGCCTGG ACGGCGGCAT CGACGGCTTG GTTCACCTGT CTGACATCTC CTGGAACGTT
GCAGGCGAAG AAGCAGTTCG TGAATACAAA AAAGGCGACG AAATCGCTGC AGTTGTTCTG
CAGGTTGACG CAGAACGTGA ACGTATCTCC CTGGGCGTTA AACAGCTCGC AGAAGATCCG
TTCAACAACT GGGTTGCTCT GAACAAGAAA GGCGCTATCG TAACCGGTAA AGTAACTGCA
GTTGACGCTA AAGGCGCAAC CGTAGAACTG GCTGACGGCG TTGAAGGTTA CCTGCGTGCT
TCTGAAGCAT CCCGTGACCG CGTTGAAGAC GCTACCCTGG TTCTGAGCGT TGGCGACGAA
GTTGAAGCTA AATTCACCGG CGTTGATCGT AAAAACCGCG CAATCAGCCT GTCTGTTCGT
GCGAAAGACG AAGCTGACGA GAAAGATGCA ATCGCAACTG TTAACAAACA GGAAGATGCA
AACTTCTCCA ACAACGCAAT GGCTGAAGCT TTCAAAGCAG CTAAAGGCGA GTAA
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| Protein sequence | MTESFAQLFE ESLKEIETRP GSIVRGVVVA IDKDVVLVDA GLKSESAIPA EQFKNAQGEL
EIQVGDEVDV ALDAVEDGFG ETLLSREKAK RHEAWITLEK AYEDAETVTG VINGKVKGGF
TVELNGIRAF LPGSLVDVRP VRDTLHLEGK ELEFKVIKLD QKRNNVVVSR RAVIESENSA
ERDQLLENLQ EGMEVKGIVK NLTDYGAFVD LGGVDGLLHI TDMAWKRVKH PSEIVNVGDE
ITVKVLKFDR ERTRVSLGLK QLGEDPWVAI AKRYPEGTKL TGRVTNLTDY GCFVEIEEGV
EGLVHVSEMD WTNKNIHPSK VVNVGDVVEV MVLDIDEERR RISLGLKQCK ANPWQQFAET
HNKGDRVEGK IKSITDFGIF IGLDGGIDGL VHLSDISWNV AGEEAVREYK KGDEIAAVVL
QVDAERERIS LGVKQLAEDP FNNWVALNKK GAIVTGKVTA VDAKGATVEL ADGVEGYLRA
SEASRDRVED ATLVLSVGDE VEAKFTGVDR KNRAISLSVR AKDEADEKDA IATVNKQEDA
NFSNNAMAEA FKAAKGE
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