Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E2416 |
Symbol | ihfB |
ID | 6269830 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 2212348 |
End bp | 2212632 |
Gene Length | 285 bp |
Protein Length | 94 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641726411 |
Product | integration host factor subunit beta |
Protein accession | YP_001880893 |
Protein GI | 187733349 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
TIGRFAM ID | [TIGR00988] integration host factor, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.000431379 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCAAGT CAGAATTGAT AGAAAGACTT GCCACCCAGC AATCGCACAT TCCCGCCAAG ACGGTTGAAG ATGCAGTAAA AGAGATGCTG GAGCATATGG CCTCGACTCT TGCGCAGGGC GAGCGTATTG AAATCCGCGG TTTCGGCAGT TTCTCTTTGC ACTACCGCGC ACCACGTACC GGACGTAATC CGAAGACTGG CGATAAAGTA GAACTGGAAG GAAAATACGT TCCTCACTTT AAACCTGGTA AAGAACTGCG CGATCGCGCC AATATTTACG GTTAA
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Protein sequence | MTKSELIERL ATQQSHIPAK TVEDAVKEML EHMASTLAQG ERIEIRGFGS FSLHYRAPRT GRNPKTGDKV ELEGKYVPHF KPGKELRDRA NIYG
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