| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E2408 |
|---|
| Symbol | |
|---|
| ID | 6270394 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | - |
|---|
| Start bp | 2203391 |
|---|
| End bp | 2204623 |
|---|
| Gene Length | 1233 bp |
|---|
| Protein Length | 410 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641726405 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001880887 |
|---|
| Protein GI | 187732136 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3214] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.173137 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCTGC CGCACCTCTC CCTTGCTGAT GCGCGTAATC TTCACCTTGC CGCACAAGGC
CTGTTAAACA AACCCCGCCG TCGAGCGTCG TTGGAGGATA TTCCGGCAAC GATCTCCAGC
ATGTCCTTGC TGCAAATCGA TACCATCAAT ATTGTTGCCC GTAGTCCATA TCTGGTGCTT
TTCAGTCGTC TGGGAAATTA TCCTGCCCAG TGGCTGGATG AGTCTCTGGC GCGTGGCGAA
TTAATGGAAT ACTGGGCGCA TGAAGCCTGC TTTATGCCGC GTAGCGACTT TCGTCTTATT
CGCCACCGCA TGCTGGCACC TGAAAAAATG GGCTGGAAAT ACAAAGACGC CTGGATGCAG
GAACATGAGG CGGAAATTGC ACAGTTAATT CAGCATATTC ATGATAAGGG GCCGGTACGT
TCAGCCGATT TTGAGCATCC TCGTAAAGGT GCAAGCGGCT GGTGGGAATG GAAGCCGCAT
AAACGGCATC TGGAAGGTTT ATTTACTGCC GGAAAGGTGA TGGTGATTGA ACGGCGCAAC
TTCCAGCGCG TTTATGATTT AACCCACCGT GTCATGCCTG ACTGGGATGA TGAGCGCGAT
CTCGTTTCGC AAACAGAAGC AGAAATCATC ATGCTGGATA ACAGTGCGCG TAGCCTGGGA
ATATTCCGCG AACAGTGGCT GGCAGATTAC TATCGGCTGA AACGTCCGGC ACTGGCGGCG
TGGCGCGAAG CGAGGGCTGA ACAGCAGCAA ATCATTGCTG TGCATGTTGA AAAATTGGGC
AATCTTTGGC TGCATGCTGA TTTGCTGCCG CTACTCGAGC GTGCGCTGGC CGGAAAGCTC
ACTGCAACGC ACAGCGCGGT ACTTTCGCCT TTTGATCCTG TTGTCTGGGA TCGCAAACGC
GCAGAGCAGC TTTTTGATTT TAGCTACCGG CTGGAGTGCT ATACCCCAGC GCCGAAACGC
CAGTATGGCT ATTTTGTTCT GCCATTATTA CATCGTGGGC AATTAGTTGG GCGAATGGAT
GCCAAAATGC ATCGCCAGAC AGGCATCCTT GAAGTTATCT CTCTGTGGTT ACAGGAAGGC
ATTAAACCAA CGACAATGCT GCAAAAAGGG TTACGTCAGG CGATTACTGA TTTCGCGAGC
TGGCAGCAGG CAACGCGGGT GACATTAGGA CGCTGCCCGC AAGGTCTCTT TACTGATTGC
CGCACTGGCT GGGAAATAGA CCCCGTCGCA TAA
|
|---|
| Protein sequence | MSLPHLSLAD ARNLHLAAQG LLNKPRRRAS LEDIPATISS MSLLQIDTIN IVARSPYLVL
FSRLGNYPAQ WLDESLARGE LMEYWAHEAC FMPRSDFRLI RHRMLAPEKM GWKYKDAWMQ
EHEAEIAQLI QHIHDKGPVR SADFEHPRKG ASGWWEWKPH KRHLEGLFTA GKVMVIERRN
FQRVYDLTHR VMPDWDDERD LVSQTEAEII MLDNSARSLG IFREQWLADY YRLKRPALAA
WREARAEQQQ IIAVHVEKLG NLWLHADLLP LLERALAGKL TATHSAVLSP FDPVVWDRKR
AEQLFDFSYR LECYTPAPKR QYGYFVLPLL HRGQLVGRMD AKMHRQTGIL EVISLWLQEG
IKPTTMLQKG LRQAITDFAS WQQATRVTLG RCPQGLFTDC RTGWEIDPVA
|
|---|
| |