| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E2392 |
|---|
| Symbol | |
|---|
| ID | 6268523 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | - |
|---|
| Start bp | 2185662 |
|---|
| End bp | 2186210 |
|---|
| Gene Length | 549 bp |
|---|
| Protein Length | 182 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641726391 |
|---|
| Product | putative exported protein, Tat-dependent |
|---|
| Protein accession | YP_001880873 |
|---|
| Protein GI | 187730752 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3108] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.163953 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACAAAT TCGACGCTAA TCGCCGCAAA TTGCTGGCGC TTGGTGGCGT TGCACTCGGT
GCCGCCATCC TGCCAACCCC TGCGTTTGCA ACACTCTCTA CCCCACGCCC GCGCATTTTG
ACACTCAATA ATCTTCATAC CGGAGAGTCA ATCAAAGCGG AGTTTTTCGA TGGCAGAGGC
TATATTCAGG AAGAATTGGC AAAACTTAAC CATTTTTTCC GCGATTACCG CGCGAACAAA
ATAAAGTCCA TCGACCCAGG ATTATTCGAC CAGTTGTATC GCCTGCAAGG GTTGTTAGGC
ACGCGCAAAC CGGTGCAACT CATTTCCGGT TATCGTTCCA TTGATACCAA CAATGAACTA
CGCGCCCGCA GCCGTGGAGT AGCGAAGAAA AGCTATCACA CTAAAGGCCA GGCGATGGAT
TTCCATATTG AAGGTATCGC GTTAAGCAAT ATTCGCAAAG CCGCGTTATC TATGCGCGCA
GGTGGTGTAG GATATTACCC ACGTAGTAAC TTTGTGCATA TTGATACCGG GCCAGCACGG
CACTGGTAG
|
|---|
| Protein sequence | MDKFDANRRK LLALGGVALG AAILPTPAFA TLSTPRPRIL TLNNLHTGES IKAEFFDGRG
YIQEELAKLN HFFRDYRANK IKSIDPGLFD QLYRLQGLLG TRKPVQLISG YRSIDTNNEL
RARSRGVAKK SYHTKGQAMD FHIEGIALSN IRKAALSMRA GGVGYYPRSN FVHIDTGPAR
HW
|
|---|
| |