| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E2386 |
|---|
| Symbol | pepN |
|---|
| ID | 6271742 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | - |
|---|
| Start bp | 2176053 |
|---|
| End bp | 2178665 |
|---|
| Gene Length | 2613 bp |
|---|
| Protein Length | 870 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641726385 |
|---|
| Product | aminopeptidase N |
|---|
| Protein accession | YP_001880867 |
|---|
| Protein GI | 187732697 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0308] Aminopeptidase N |
|---|
| TIGRFAM ID | [TIGR02414] aminopeptidase N, Escherichia coli type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTCAAC AGCCACAAGC CAAATACCGT CACGATTATC GTGCGCCGGA TTACCAGATT
ACTGATATTG ACTTGACCTT TGACCTCGAC GCGCAAAAGA CGGTCGTTAC CGCGGTCAGC
CAGGCTGTCC GTCATGGTGC ATCAGATGCT CCGCTTCGTC TCAACGGCGA AGACCTCAAA
CTGGTTTCTG TTCATATTAA TGATGAGCCG TGGACCGCCT GGAAAGAAGA AGAGGGCGCA
CTGGTCATCA GTAATTTGCC GGAGCATTTT ACGCTTAAGA TCGTTAATGA AATAAGCCCG
GCGGCGAATA CCGCGCTGGA AGGGCTTTAT CAGTCAGGCG ATGCGCTTTG CACCCAGTGT
GAAGCCGAAG GTTTCCGCCA TATTACGTAT TATCTCGACC GCCCGGACGT GCTGGCGCGT
TTTACCACCA AAATTATTGC CGATAAAACC AAATATCCCT TCCTGCTTTC CAACGGTAAC
CGCGTTGCGC AAGGTGAACT GGAAAACGGA CGCCATTGGG TACAGTGGCA GGACCCGTTC
CCGAAACCGT GCTACCTGTT TGCGCTGGTG GCAGGCGACT TTGATGTACT GCGCGACACC
TTTACCACGC GTTCTGGTCG CGAAGTGGCG CTGGAGCTGT ACGTCGATCG CGGCAACCTT
GATCGCGCGC CGTGGGCGAT GACCTCGCTG AAAAACTCAA TGAAATGGGA TGAAGAACGC
TTCGGCCTGG AGTATGACCT CGACATCTAT ATGATCGTCG CGGTGGATTT CTTCAATATG
GGCGCAATGG AGAATAAGGG TTTGAATATC TTTAACTCCA AATATGTGCT GGCCCGCACC
GACACCGCCA CTGACAAAGA TTACCTCGAT ATTGAACGCG TTATCGGCCA TGAATATTTC
CATAACTGGA CCGGTAACCG AGTCACCTGC CGCGACTGGT TCCAGCTCAG CCTGAAAGAA
GGTTTAACCG TCTTCCGCGA TCAGGAATTC AGCTCTGACC TTGGTTCCCG TGCAGTTAAC
CGCATCAATA ATGTGCGCAC CATGCGCGGA TTGCAGTTTG CGGAAGACGC CAGCCCGATG
GCGCACCCGA TCCGCCCGGA CATGGTCATT GAGATGAACA ACTTCTATAC CCTGACCGTT
TACGAGAAGG GCGCGGAAGT GATCCGTATG ATCCACACCC TGCTGGGCGA AGAAAACTTC
CAGAAAGGGA TGCAACTCTA TTTCGAGCGC CATGATGGCA GCGCGGCAAC CTGCGACGAC
TTTGTGCAGG CGATGGAAGA TGCGTCGAAT GTCGATCTCT CCCATTTCCG CCGTTGGTAC
AGCCAGTCTG GCACGCCGAT TGTGACCGTC AAAGACGACT ACAATCCGGA AACCGAGCAG
TACACCCTGA CCATCAGCCA GCGCACGCCA GCCACGCCGG ATCAGGCAGA AAAACAGCCG
CTGCATATTC CGTTTGCCAT CGAATTGTAT GACAACGAAG GCAAAGTGAT CTCGTTGCAG
AAAGGCGGTC ATCCGGTGAA TTCCGTGCTG AACGTCACCC AGGCGGAACA GACCTTTGTT
TTTGATAATG TCTACTTCCA GCCGGTGCCT GCGCTGCTGT GCGAATTCTC TGCGCCAGTG
AAACTGGAAT ATAAGTGGAG CGATCAGCAA CTGACCTTCC TGATGCGTCA TGCGCGTAAT
GATTTCTCCC GCTGGGATGC GGCACAAAGC CTGCTGGCAA CCTACATCAA GCTGAACGTC
GCCCGACATC AGCAAGGGCA GCCGCTGTCT CTGCCGGTAC ATGTGGCTGA CGCTTTCCGC
GCAGTGCTGC TCGATGAGAA GATTGATCCG GCGCTGGCGG CAGAAATCCT GACGCTGCCT
TCTGTCAATG AAATGGCTGA ACTGTTCGAT ATCATCGACC CGATTGCTAT TGCCGAAGTA
CGCGAAGCAC TCACTCGTAC TCTGGCGACT GAACTGGCGG ATGAGCTGCT GGCTATTTAC
AACGCGAATT ACCAGAGCGA GTACCGTGTT GAGCATGAAG ATATTGCGAA ACGCACTCTG
CGTAATGCCT GCCTGCGCTT CCTTGCTTTT GGTGAAACGC ATCTGGCTGA CGTGCTGGTG
AGCAAGCAGT TCCACGAAGC GAACAATATG ACCGATGCGC TGGCGGCGCT TTCTGCGGCG
GTTGCCGCAC AGCTGCCATG CCGTGATGCG CTGATGCAGG AATACGACGA TAAGTGGCAT
CAGGACGGTC TGGTGATGGA TAAATGGTTT ATCCTGCAAG CCACCAGCCC GGCGGCGAAT
GTGCTGGAGA CGGTGCGCGG TCTGTTGCAG CATCGCTCAT TTACCATGAG CAACCCGAAC
CGTATTCGTT CGTTGATTGG CGCGTTTGCG GGCAGCAATC CGGCAGCGTT CCATGCCGAA
GATGGGAGCG GTTACCAGTT CCTGGTGGAA ATGCTTACCG ACCTCAACAG CCGTAACCCG
CAGGTGGCTT CACGTCTGAT TGAACCGCTG ATTCGCCTGA AACGTTATGA TGCCAAACGT
CAGGAGAAAA TGCGCGCGGC GCTGGAACAG TTGAAAGGGC TGGAAAATCT CTCTGGCGAT
CTGTACGAGA AGATCACCAA AGCACTGGCT TGA
|
|---|
| Protein sequence | MTQQPQAKYR HDYRAPDYQI TDIDLTFDLD AQKTVVTAVS QAVRHGASDA PLRLNGEDLK
LVSVHINDEP WTAWKEEEGA LVISNLPEHF TLKIVNEISP AANTALEGLY QSGDALCTQC
EAEGFRHITY YLDRPDVLAR FTTKIIADKT KYPFLLSNGN RVAQGELENG RHWVQWQDPF
PKPCYLFALV AGDFDVLRDT FTTRSGREVA LELYVDRGNL DRAPWAMTSL KNSMKWDEER
FGLEYDLDIY MIVAVDFFNM GAMENKGLNI FNSKYVLART DTATDKDYLD IERVIGHEYF
HNWTGNRVTC RDWFQLSLKE GLTVFRDQEF SSDLGSRAVN RINNVRTMRG LQFAEDASPM
AHPIRPDMVI EMNNFYTLTV YEKGAEVIRM IHTLLGEENF QKGMQLYFER HDGSAATCDD
FVQAMEDASN VDLSHFRRWY SQSGTPIVTV KDDYNPETEQ YTLTISQRTP ATPDQAEKQP
LHIPFAIELY DNEGKVISLQ KGGHPVNSVL NVTQAEQTFV FDNVYFQPVP ALLCEFSAPV
KLEYKWSDQQ LTFLMRHARN DFSRWDAAQS LLATYIKLNV ARHQQGQPLS LPVHVADAFR
AVLLDEKIDP ALAAEILTLP SVNEMAELFD IIDPIAIAEV REALTRTLAT ELADELLAIY
NANYQSEYRV EHEDIAKRTL RNACLRFLAF GETHLADVLV SKQFHEANNM TDALAALSAA
VAAQLPCRDA LMQEYDDKWH QDGLVMDKWF ILQATSPAAN VLETVRGLLQ HRSFTMSNPN
RIRSLIGAFA GSNPAAFHAE DGSGYQFLVE MLTDLNSRNP QVASRLIEPL IRLKRYDAKR
QEKMRAALEQ LKGLENLSGD LYEKITKALA
|
|---|
| |