| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E2376 |
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| Symbol | |
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| ID | 6269790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | - |
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| Start bp | 2166416 |
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| End bp | 2167486 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641726379 |
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| Product | putative fimbrial protein |
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| Protein accession | YP_001880861 |
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| Protein GI | 187731105 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3539] P pilus assembly protein, pilin FimA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0000169866 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGATAA TCTTTGGAGA AAAATGCGTG TTATTACTAC GACTATTTTT TGCCGCCGTC
TTAATGCTAT GGTGCGCTCA AACTGCTGCT TATAGCGGGC AGTGTCATAC CACTCAGGGG
AATCCGTATA TTGGCGTCAA TTTTGGCGTT AAAACCCTGG AGGAAGAAGA AAATACGGCT
GGAGTAGTTA AAGACAAATT TTATCAGTGG AACGAATCGA ATGATTATTA TGTTTCCTGT
GATTGCGATA AAGACAATGT CAGAAGTGGC CGATGGGCAT TCGCCGCGGA TTCACCGTTA
GTCTATTTAG GCGACAACTG GTACAAAATT AATGACTATC TTGCCGCCAA AGTTTTATTG
CAGGTTAAAG GCAGTTCTCC TACTGCGGTT CCTTTCGAAA ACGTGGGCAC AGGGGCAGAT
ACACGATGGC ATATTTGCGA TCCCGGCGGT CAACGTTTAG GTGGCCAGGG GGCTAGCGGT
AATAGCGGTA GCTTTTCCCT GAAAATATTG CAGCCGTTCG TTGGTTCGGT CGTCATTCCT
CCTATGGCGC TGGCGCGATT ATTTGAATGC TACAACATAC CCGCAGGTGA TTCCTGCACG
ACTACAGGTA CACCGGTTTT AGTGTATTAC CTGTCTGGTA CTATCAATTC ACTTGGCTCA
TGTTCCGTCA ATGCCGGAGA AACAATCGAG GTCGATCTGG GCGACGTATT TGCGGCTAAC
TTTCGTGTTG TAGGGCATAA GCCTCTTGGG GCCAGAACGG CAGAACTTGC AATTCCAGTC
AGGTGTAACA CGGGAAACGC GGGGTTAGTT AACGTCAACC TGAGTCTGAC GGCAACTACA
GACCCCAGCT ATCCCCAGGC GATTAAGACG TCACGTCCTG GCGTGGGCGT GGTGGTGACC
GATAGCCAGA ACAACATTAT TTCCCCTGCT GGTGGAACAT TACCGCTCTC TATTCCTGAT
GATGCAGACA GTATCGCGCG AATGAATGTC TATCCAGTCA GCACGACAGG TGTACCACCA
GAAACCGGGC GATTTGAAGC CACGGCAACG GTGAGAATAA ATTTTGATTA A
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| Protein sequence | MQIIFGEKCV LLLRLFFAAV LMLWCAQTAA YSGQCHTTQG NPYIGVNFGV KTLEEEENTA
GVVKDKFYQW NESNDYYVSC DCDKDNVRSG RWAFAADSPL VYLGDNWYKI NDYLAAKVLL
QVKGSSPTAV PFENVGTGAD TRWHICDPGG QRLGGQGASG NSGSFSLKIL QPFVGSVVIP
PMALARLFEC YNIPAGDSCT TTGTPVLVYY LSGTINSLGS CSVNAGETIE VDLGDVFAAN
FRVVGHKPLG ARTAELAIPV RCNTGNAGLV NVNLSLTATT DPSYPQAIKT SRPGVGVVVT
DSQNNIISPA GGTLPLSIPD DADSIARMNV YPVSTTGVPP ETGRFEATAT VRINFD
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