Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E2366 |
Symbol | pqiB |
ID | 6268613 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 2154394 |
End bp | 2156034 |
Gene Length | 1641 bp |
Protein Length | 546 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641726370 |
Product | paraquat-inducible protein B |
Protein accession | YP_001880852 |
Protein GI | 187731372 |
COG category | [R] General function prediction only |
COG ID | [COG3008] Paraquat-inducible protein B |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.547013 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAATCTA ATAATGGGGA AGCCAAAATC CAGAAAGTGA AGAACTGGTC TCCCGTGTGG ATATTTCCTA TCGTCACGGC GCTCATTGGG GCCTGGGTTC TATTTTATCA TTACAGCCAT CAGGGACCGG AAGTGACCCT GATCACCGCG AATGCGGAAG GAATTGAAGG TGGCAAAACC ACCATTAAAA GCCGTAGCGT TGACGTCGGC GTGGTTGAAA GCGCCACACT GGCTGATGAT TTGACGCACG TTGAAATCAA AGCGCGGCTG AATTCCGGTA TGGAAAAATT GCTGCATAAA GACACCGTCT TTTGGGTGGT GAAACCGCAG ATTGGTCGCG AAGGGATTAG CGGCCTGGGA ACGCTGCTGT CTGGAGTTTA TATCGAACTG CAGCCAGGCG CGAAAGGCAG CAAAATGGAT AAATACGATT TGCTGGACTC GCCACCGTTG GCCCCGCCTG ATGCGAAAGG TATCCGTGTG ATTCTCGATA GCAAAAAAGC CGGGCAGCTC TCGCCAGGAG ATCCGGTGCT GTTCCGTGGC TATCGGGTAG GTTCGGTTGA AACCAGCACC TTCGATACGC AAAAACGCAA TATCAGTTAT CAACTGTTCA TCAATGCACC TTATGACCGA CTGGTGACCA GCAATGTTCG CTTCTGGAAA GATAGTGGCA TTGCGGTTGA TCTGACGTCA GCGGGGATGC GTGTGGAGAT GGGCTCATTG ACAACGCTGC TTAGTGGCGG TGTTAGCTTT GATGTGCCGG AAGGTCTGGA TTTAGGGCAG CCAGTGGCAC CGAAAACAGC TTTCGTTTTG TATGATGATC AGAAGAGCAT TCAGGATTCG TTGTACACCG ATCACATTGA TTATCTGATG TTCTTTAAAG ATTCGGTACG CGGTCTGCAA CCGGGAGCTC CGGTAGAATT CCGGGGTATT CGCCTGGGTA CCGTAAGCAA AGTGCCATTC TTTGCGCCGA ATATGCGTCA GACATTTAAC GATGATTACC GTATTCCGGT ACTGATTCGT ATCGAGCCAG AGCGGCTGAA AATGCAGCTT GGCGAAAATA CGGATGTTGT TGAGCACCTT GGCGAATTGT TGAAACGTGG TTTACGCGGA TCGCTGAAAA CCGGAAACCT GGTCACTGGT GCACTGTATG TTGATCTCGA TTTCTATCCA AATACGCCTG CAATAACCGG TATTCGTGAA TTTAATGGTT ATCAGATTAT CCCTACTGTT AGCGGCGGCC TGGCGCAAAT CCAGCAACGA CTGATGGAAG CGTTGGATAA GATCAACAAA CTGCCATTGA ATCCGATGAT TGAACAGGCA ACCAGTACGT TTTCTGAAAG TCAGCGCACA ATGAAAAACC TGCAAACGAC GCTGGATAGC ATGAACAAGA TCCTCGCTAG CCAGTCGATG CAGCAGTTGC CGACGGATAT GCAGTCAACG TTGCGTGAAT TGAATCGCAG CATGCAGGGC TTCCAGCCTG GCTCCGCAGC CTACAACAAG ATGGTGGCGG ATATGCAGCG CCTTGATCAG GTGTTGCGAG AACTGCAACC GGTGCTGAAA ACGCTCAATG AGAAGAGTAA CGCGCTGGTA TTTGAAGCGA AGGACAAAAA AGATCCAGAG CCGAAGAGGG CGAAACAATG A
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Protein sequence | MESNNGEAKI QKVKNWSPVW IFPIVTALIG AWVLFYHYSH QGPEVTLITA NAEGIEGGKT TIKSRSVDVG VVESATLADD LTHVEIKARL NSGMEKLLHK DTVFWVVKPQ IGREGISGLG TLLSGVYIEL QPGAKGSKMD KYDLLDSPPL APPDAKGIRV ILDSKKAGQL SPGDPVLFRG YRVGSVETST FDTQKRNISY QLFINAPYDR LVTSNVRFWK DSGIAVDLTS AGMRVEMGSL TTLLSGGVSF DVPEGLDLGQ PVAPKTAFVL YDDQKSIQDS LYTDHIDYLM FFKDSVRGLQ PGAPVEFRGI RLGTVSKVPF FAPNMRQTFN DDYRIPVLIR IEPERLKMQL GENTDVVEHL GELLKRGLRG SLKTGNLVTG ALYVDLDFYP NTPAITGIRE FNGYQIIPTV SGGLAQIQQR LMEALDKINK LPLNPMIEQA TSTFSESQRT MKNLQTTLDS MNKILASQSM QQLPTDMQST LRELNRSMQG FQPGSAAYNK MVADMQRLDQ VLRELQPVLK TLNEKSNALV FEAKDKKDPE PKRAKQ
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