Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E2361 |
Symbol | |
ID | 6270636 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 2148808 |
End bp | 2150568 |
Gene Length | 1761 bp |
Protein Length | 586 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641726365 |
Product | peptidase, S16 (lon protease) family |
Protein accession | YP_001880847 |
Protein GI | 187732130 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1067] Predicted ATP-dependent protease |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000000000251656 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGACCATTA CGAAACTTGC ATGGCGTGAC CTGGTTCCTG ATACCGATAG CTATCAGGAA ATATTTGCTC AGCCACATTT GATTGACGAA AACGATCCTT TATTCAGTGA TACTCAACCG CGGCTGCAAT TTGCGCTGGA GCAGTTGCTG CATACGCGAG CATCCTCCTC TTTTATGCTG GCTAAGGCCC CGGAAGAGTC TGAGTATCTG AATCTTATTG CCGATGCCGC GCGTACGCTA CAAAGCGATG CAGGCCAACT GGTGGGCGAT CACTATGAGG TTTCCGGCCA CTCCATCCGC TTACGTCACG CAGTGAGTGC AGATGATAAT TTTGCGACTT TAACGCAAGT TGTCGCTGCC GACTGGGTAG AAGCGGAGCA ACTCTTTGGC TGCCTGCGCC AGTTTAATGG CGACATTACC CTGCAGCCTG GTCTGGTGCA TCAGGCAAAT GGCGGTATTC TCATCATCTC TTTGCGTACA CTGCTGGCGC AACCTCTGCT GTGGATGCGG CTGAAAAATA TCGTTAACCG CGAGCGTTTT GACTGGGTTG CGTTTGATGA GTCGCGCCCT CTCCCCGTCT CTGTGCCTTC GATGCCATTG AAGCTGAAAG TCATTCTGGT AGGCGAACGC GAATCATTGG CTGATTTCCA GGAGATGGAG CCAGAGCTTT CAGAGCAGGC TATTTATAGC GAATTTGAAG ATACTCTGCA GATTGTCGAT GCGGAGTCAG TAAGCCAGTG GTGTCGCTGG GTGACATTTA CCGCCAGACA TAATCACTTA CCTGCCCCGG GAGCGGATGC CTGGCCGGTA CTTATCCGCG AAGCAGCACG CTACACCGGT GAACAAGAAA CACTTCCGCT TAGCCCGCAG TGGATCCTCC GCCAGTGTAA AGAGGTCGCC TCCCTGTGTG ATGGCGACAC CTTCTCCGGC GAGCAGCTAA ACTTAATGCT GCAGCAGCGT GAATGGCGCG AAGGTTTCCT CGCTGAACGT ATGCAGGATG AGATCCTTCA GGAGCAAATC CTGATTGAAA CCGAAGGCGA ACGCATCGGG CAAATTAACG CCCTTTCGGT CATTGAATTT CCGGGTCATC CACGCGCTTT TGGCGAACCT TCTCGCATTA GCTGCGTTGT GCATATTGGC GATGGTGAAT TCACCGACAT CGAACGCAAA GCGGAACTTG GCGGCAATAT CCATGCGAAA GGGATGATGA TCATGCAAGC GTTCCTGATG TCGGAACTAC AGCTTGAGCA ACAGATCCCC TTCTCAGCAT CGCTGACATT TGAGCAGTCA TACAGTGAAG TTGATGGAGA TAGTGCCTCG ATGGCTGAAC TCTGCGCCCT GATAAGCGCC CTCGCCGATG TGCCGGTGAA TCAGAGTATC GCTATCACAG GTTCAGTCGA TCAGTTCGGT CGCGCCCAGC CGGTCGGTGG TTTAAATGAG AAAATCGAAG GCTTCTTTGC TATTTGCCAG CAACGTGAGT TAACCGGGAA ACAAGGTGTC ATTATCCCCA CAGCTAACGT TCGCCATTTA AGTCTTCACA GTGAACTGGT GAAAGCGGTA GAAGAAGGCA AATTCACCAT CTGGGCAGTA GACGATGTGA CTGACGCACT GCCGTTATTA TTAAATCTGG TGTGGGATGG CGAAGGCCAA ACGACGCTGA TGCAAACCAT CCAGGAACGT ATCGCGCAAG CATCGCAACA GGAAGGACGT CACCGTTTTC CATGGCCATT ACGTTGGCTG AACTGGTTTA TTCCGAACTG A
|
Protein sequence | MTITKLAWRD LVPDTDSYQE IFAQPHLIDE NDPLFSDTQP RLQFALEQLL HTRASSSFML AKAPEESEYL NLIADAARTL QSDAGQLVGD HYEVSGHSIR LRHAVSADDN FATLTQVVAA DWVEAEQLFG CLRQFNGDIT LQPGLVHQAN GGILIISLRT LLAQPLLWMR LKNIVNRERF DWVAFDESRP LPVSVPSMPL KLKVILVGER ESLADFQEME PELSEQAIYS EFEDTLQIVD AESVSQWCRW VTFTARHNHL PAPGADAWPV LIREAARYTG EQETLPLSPQ WILRQCKEVA SLCDGDTFSG EQLNLMLQQR EWREGFLAER MQDEILQEQI LIETEGERIG QINALSVIEF PGHPRAFGEP SRISCVVHIG DGEFTDIERK AELGGNIHAK GMMIMQAFLM SELQLEQQIP FSASLTFEQS YSEVDGDSAS MAELCALISA LADVPVNQSI AITGSVDQFG RAQPVGGLNE KIEGFFAICQ QRELTGKQGV IIPTANVRHL SLHSELVKAV EEGKFTIWAV DDVTDALPLL LNLVWDGEGQ TTLMQTIQER IAQASQQEGR HRFPWPLRWL NWFIPN
|
| |