Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E2345 |
Symbol | |
ID | 6270198 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 2134912 |
End bp | 2135571 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641726349 |
Product | hypothetical protein |
Protein accession | YP_001880831 |
Protein GI | 187730886 |
COG category | [R] General function prediction only |
COG ID | [COG0670] Integral membrane protein, interacts with FtsH |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.0311475 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATCGTA TTGTTAGTTC TTCACATGAC CGTACATCAC TGCTTAGCAC CCATAAGGTG CTGCGTAATA CCTATTTTCT GCTGAGCCTG ACGCTGGCCT TTTCGGCGAT TACCGCAACT GCCAGTACGG TGCTGATGCT GCCATCTCCG GGTCTGATTC TGACGCTGGT GGGTATGTAT GGTTTGATGT TCCTGACCTA TAAAACGGCG AATAAGCCGA CCGGGATTAT CTCCGCATTC GCCTTTACCG GTTTTCTGGG TTATATCCTC GGACCTATTC TGAACACCTA TCTGTCTGCC GGAATGGGTG ACGTAATCGC TATGGCACTG GGCGGAACGG CGTTAGTGTT CTTCTGCTGC TCTGCATATG TGCTGACCAC CCGCAAAGAT ATGTCGTTCC TCGGCGGTAT GCTGATGGCG GGTATTGTGG TGGTGCTGAT TGGTATGGTT GCTAATATCT TCCTGCAGCT GCCTGCTCTG CATCTGGCGA TCAGCGCGGT CTTCATTTTG ATCTCCTCTG GCGCTATTTT GTTTGAAACC AGCAACATCG TTCATGGCGG TGAAACGAAC TATATTCGTG CCACGGTTAG CCTGTATGTT TCGCTGTACA ACATCTTCGT CAGCCTGCTG AGCATTCTGG GCTTCGCCAG CCGCGATTAA
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Protein sequence | MDRIVSSSHD RTSLLSTHKV LRNTYFLLSL TLAFSAITAT ASTVLMLPSP GLILTLVGMY GLMFLTYKTA NKPTGIISAF AFTGFLGYIL GPILNTYLSA GMGDVIAMAL GGTALVFFCC SAYVLTTRKD MSFLGGMLMA GIVVVLIGMV ANIFLQLPAL HLAISAVFIL ISSGAILFET SNIVHGGETN YIRATVSLYV SLYNIFVSLL SILGFASRD
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