Gene SbBS512_E2345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E2345 
Symbol 
ID6270198 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp2134912 
End bp2135571 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content51% 
IMG OID641726349 
Producthypothetical protein 
Protein accessionYP_001880831 
Protein GI187730886 
COG category[R] General function prediction only 
COG ID[COG0670] Integral membrane protein, interacts with FtsH 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.0311475 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCGTA TTGTTAGTTC TTCACATGAC CGTACATCAC TGCTTAGCAC CCATAAGGTG 
CTGCGTAATA CCTATTTTCT GCTGAGCCTG ACGCTGGCCT TTTCGGCGAT TACCGCAACT
GCCAGTACGG TGCTGATGCT GCCATCTCCG GGTCTGATTC TGACGCTGGT GGGTATGTAT
GGTTTGATGT TCCTGACCTA TAAAACGGCG AATAAGCCGA CCGGGATTAT CTCCGCATTC
GCCTTTACCG GTTTTCTGGG TTATATCCTC GGACCTATTC TGAACACCTA TCTGTCTGCC
GGAATGGGTG ACGTAATCGC TATGGCACTG GGCGGAACGG CGTTAGTGTT CTTCTGCTGC
TCTGCATATG TGCTGACCAC CCGCAAAGAT ATGTCGTTCC TCGGCGGTAT GCTGATGGCG
GGTATTGTGG TGGTGCTGAT TGGTATGGTT GCTAATATCT TCCTGCAGCT GCCTGCTCTG
CATCTGGCGA TCAGCGCGGT CTTCATTTTG ATCTCCTCTG GCGCTATTTT GTTTGAAACC
AGCAACATCG TTCATGGCGG TGAAACGAAC TATATTCGTG CCACGGTTAG CCTGTATGTT
TCGCTGTACA ACATCTTCGT CAGCCTGCTG AGCATTCTGG GCTTCGCCAG CCGCGATTAA
 
Protein sequence
MDRIVSSSHD RTSLLSTHKV LRNTYFLLSL TLAFSAITAT ASTVLMLPSP GLILTLVGMY 
GLMFLTYKTA NKPTGIISAF AFTGFLGYIL GPILNTYLSA GMGDVIAMAL GGTALVFFCC
SAYVLTTRKD MSFLGGMLMA GIVVVLIGMV ANIFLQLPAL HLAISAVFIL ISSGAILFET
SNIVHGGETN YIRATVSLYV SLYNIFVSLL SILGFASRD