| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E2330 |
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| Symbol | ymcB |
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| ID | 6271931 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 2117639 |
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| End bp | 2118385 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641726334 |
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| Product | group 4 capsule (G4C) polysaccharide, YmcB |
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| Protein accession | YP_001880817 |
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| Protein GI | 187731248 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.000000702109 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATAAAT TACAGTCGTA TTTCATTGCC AGCGTACTTT ACGTAATGAC ACCCCATGCC
TTTGCGCAAG GAACGGTGAC TATTTATCTG CCTGGCGAAC AACAGACACT TTCCGTTGGC
CCCATGGAAA ATGTTGTCCA GTTGGTGACA CAACCGCAAC TGCGCGATCG CCTCTGGTGG
CCTGGTGCCT TGCTGACCGA CTCTGCGGCG AAAGCTAAAG CGCTTAAAGA CTACCAACAT
GTCATGGCAC AGCTTGCTTC CTGGGAAGCA GAAGCTAACG ACGATGTGGC GGCAACGATT
AAATCCGTGC GCCAGCAGTT ACTCAATCTC AATATCACTG GTCGCTTACC GGTCAAACTG
GACCCTGATT TTGTTCGAGT GGATGAGAAC AGCAATCCCC CGTTGGTCGG GGACTATACG
CTCTATACCG TACAGCGTCC GGTGACTATT ACTCTGCTGG GTGCGGTTTC TGGGGCCGGG
CAATTGCCCT GGCAGGCAGG CCGTAGCGTT ACCGATTATC TGCAAGATCA CCCCCGCCTT
GCAGGCGCGG ACAAGAATAA CGTTATGGTG ATTACGCCTG AGGGTGAGAC TGTCGTCGCC
CCTGTTGCCC TGTGGAATAA AAGACATGTG GAACCACCGC CTGGCAGCCA GCTTTGGTTG
GGCTTTTCTG CGCATGTACT GCCCGAAAAA TATGCTGATT TAAATGACCA GATTGTGTCT
GTTTTAACGC AACGTGTTCC TGACTGA
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| Protein sequence | MNKLQSYFIA SVLYVMTPHA FAQGTVTIYL PGEQQTLSVG PMENVVQLVT QPQLRDRLWW
PGALLTDSAA KAKALKDYQH VMAQLASWEA EANDDVAATI KSVRQQLLNL NITGRLPVKL
DPDFVRVDEN SNPPLVGDYT LYTVQRPVTI TLLGAVSGAG QLPWQAGRSV TDYLQDHPRL
AGADKNNVMV ITPEGETVVA PVALWNKRHV EPPPGSQLWL GFSAHVLPEK YADLNDQIVS
VLTQRVPD
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