| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E2268 |
|---|
| Symbol | solA |
|---|
| ID | 6269619 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | + |
|---|
| Start bp | 2062601 |
|---|
| End bp | 2063719 |
|---|
| Gene Length | 1119 bp |
|---|
| Protein Length | 372 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641726285 |
|---|
| Product | N-methyltryptophan oxidase |
|---|
| Protein accession | YP_001880769 |
|---|
| Protein GI | 187730375 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
|---|
| TIGRFAM ID | [TIGR01377] sarcosine oxidase, monomeric form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 47 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATACG ATCTCATCAT TATTGGCAGC GGTTCCGTAG GCGCTGCCGC CGGGTATTAT
GCAACCCGCG CCGGTTTAAA CGTGCTAATG ACCGACGCCC ATATGCCACC GCATCAACAC
GGCAGCCACC ACGGCGATAC GCGATTAATT CGCCATGCTT ATGGTGAAGG CGAAAAGTAT
GTCCCGTTGG TCCTCCGCGC GCAAACGCTG TGGGATGAAC TTTCCCGCCA CAACGAAGAT
GATCCCATTT TTGTACGCTC TGGTGTCATT AACCTCGGCC CGGCTGACTC CGCATTTCTC
GCCAACGTCG CCCACAGCGC CGAACAGTGG CAACTCAACG TTGAAAAGCT CGATGCGCAA
GGGATTATGG CCCGCTGGCC AGAAATACGC GTCCCGGACA ACTACATCGG CTTATTTGAG
ACTGATTCCG GTTTTTTGCG CAGCGAACTG GCGATTAAAA CCTGGATCCA ACTGGCGAAG
GAAGCGGGCT GTGCGCAACT GTTCAACTGC CCGGTCACCG CAATTCGTCA TGACGATGAT
GGCGTAACTA TTGAAACCGT TGACGGTGAG TATCAGGCGA AAAAAGCGAT TGTCTGCGCG
GGAACATGGG TAAAAGACCT GCTCCCGGAG CTGCCTGTCC AGCCTGTACG TAAAGTATTT
GCCTGGTATC AGGCCGATGG CCGCTATAGC GTGAAGAATA AATTCCCGGC GTTTACCGGT
GAACTGCCCA ATGGCGATCA ATATTATGGT TTTCCGGCAG AAAACGACGC GTTGAAGATT
GGCAAACATA ACGGAGGCCA GGTTATCCAT TCAGCGGATG AACGTGTTCC GTTTGCGGAA
GTGGTCAGCG ATGGTTCGGA AGCCTTCCCG TTCTTGCGCA ATGTATTGCC GGGTATCGGT
TGCTGCCTGT ACGGCGCTGC CTGCACCTAT GATAATTCGC CTGACGAAGA TTTTATTATC
GATACCCTAC CCGGCCACGA TAATACACTG CTCATTACCG GCCTGAGTGG GCACGGTTTT
AAATTTGCGT CAGTTTTAGG GGAAATAGCT GCCGATTTTG CGCAAGACAA AAAAAGCGAT
TTTGATTTGA CGCCATTCAG GCTTTCCCGC TTCCAATAA
|
|---|
| Protein sequence | MKYDLIIIGS GSVGAAAGYY ATRAGLNVLM TDAHMPPHQH GSHHGDTRLI RHAYGEGEKY
VPLVLRAQTL WDELSRHNED DPIFVRSGVI NLGPADSAFL ANVAHSAEQW QLNVEKLDAQ
GIMARWPEIR VPDNYIGLFE TDSGFLRSEL AIKTWIQLAK EAGCAQLFNC PVTAIRHDDD
GVTIETVDGE YQAKKAIVCA GTWVKDLLPE LPVQPVRKVF AWYQADGRYS VKNKFPAFTG
ELPNGDQYYG FPAENDALKI GKHNGGQVIH SADERVPFAE VVSDGSEAFP FLRNVLPGIG
CCLYGAACTY DNSPDEDFII DTLPGHDNTL LITGLSGHGF KFASVLGEIA ADFAQDKKSD
FDLTPFRLSR FQ
|
|---|
| |