Gene SbBS512_E2261 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E2261 
SymbolmdtH 
ID6269572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp2057858 
End bp2059066 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content56% 
IMG OID641726278 
Productmultidrug resistance protein MdtH 
Protein accessionYP_001880762 
Protein GI187733205 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCGCG TATCGCAGGC GAGGAACCTG GGTAAATATT TCCTGCTCAT CGATAATATG 
CTGGTCGTGC TGGGGTTCTT TGTTGTCTTC CCGCTGATCT CTATCCGCTT CGTTGATCAA
ATGGGCTGGG CCGCCGTCAT GGTCGGTATT GCTCTCGGTC TACGCCAGTT TATTCAGCAA
GGTCTGGGTA TTTTCGGCGG CGCAATTGCC GACCGCTTTG GTGCCAAACC GATGATTGTT
ACCGGTATGC TGATGCGCGC CGCCGGATTC GCAACAATGG GTATCGCCCA CGAACCGTGG
CTATTGTGGT TTTCATGCCT GCTCTCGGGA CTCGGCGGCA CGTTGTTTGA TCCGCCGCGT
TCGGCGCTGG TGGTGAAACT AATCCGTCCA CAACAACGTG GTCGTTTTTT CTCGCTGTTG
ATGATGCAGG ACAGTGCCGG TGCGGTCATT GGCGCATTGT TGGGGAGCTG GCTGTTGCAA
TACGACTTTC GCCTGGTCTG CGCCACAGGG GCCGTTTTGT TTGTGCTGTG TGCGGCGTTC
AATGCGTGGT TGTTACCGGC ATGGAAACTC TCCACCGTAC GCACGCCCGT TCGCGAAGGC
ATGACCCGCG TGATGCGTGA CAAGCGTTTT GTCACCTATG TCCTGACGCT GGCGGGTTAC
TACATGCTGG CTGTACAAGT GATGCTGATG CTGCCAATTA TGGTCAACGA CGTGGCTGGC
GCGCCCTCTG CCGTTAAATG GATGTATGCC ATTGAAGCGT GTCTGTCGTT AACGTTGCTC
TACCCTATCG CCCGCTGGAG TGAAAAGCAT TTTCGTCTGG AACACCGGTT GATGGCTGGG
CTGTTGATAA TGTCATTAAG CATGATGCCG GTGGGCATGG TCAGCGGCCT GCAACAACTT
TTCACCCTGA TTTGTCTGTT TTATATCGGG TCGATCATTG CCGAGCCTGC GCGTGAAACC
TTAAGTGCTT CGCTGGCGGA CGCAAGAGCT CGCGGCAGCT ATATGGGGTT TAGCCGTCTG
GGTCTGGCGA TTGGCGGCGC TATTGGTTAT ATCGGTGGTG GCTGGCTGTT TGACCTGGGC
AAATCGGCGC ACCAGCCAGA GCTTCCGTGG ATGATGCTGG GAATTATTGG CATCTTCACT
TTCCTTGCGC TGGGTTGGCA GTTTAGTCAG AAACGCGCCG CGCGTCGTTT GCTGGAACGC
GACGCCTGA
 
Protein sequence
MSRVSQARNL GKYFLLIDNM LVVLGFFVVF PLISIRFVDQ MGWAAVMVGI ALGLRQFIQQ 
GLGIFGGAIA DRFGAKPMIV TGMLMRAAGF ATMGIAHEPW LLWFSCLLSG LGGTLFDPPR
SALVVKLIRP QQRGRFFSLL MMQDSAGAVI GALLGSWLLQ YDFRLVCATG AVLFVLCAAF
NAWLLPAWKL STVRTPVREG MTRVMRDKRF VTYVLTLAGY YMLAVQVMLM LPIMVNDVAG
APSAVKWMYA IEACLSLTLL YPIARWSEKH FRLEHRLMAG LLIMSLSMMP VGMVSGLQQL
FTLICLFYIG SIIAEPARET LSASLADARA RGSYMGFSRL GLAIGGAIGY IGGGWLFDLG
KSAHQPELPW MMLGIIGIFT FLALGWQFSQ KRAARRLLER DA