Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E2248 |
Symbol | flgF |
ID | 6272212 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 2048578 |
End bp | 2049333 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641726267 |
Product | flagellar basal body rod protein FlgF |
Protein accession | YP_001880751 |
Protein GI | 187731130 |
COG category | [N] Cell motility |
COG ID | [COG4787] Flagellar basal body rod protein |
TIGRFAM ID | [TIGR02490] flagellar basal-body rod protein FlgF [TIGR03506] fagellar hook-basal body proteins |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 0.777669 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATCACG CAATTTATAC TGCGATGGGA GCAGCCAGCC AGACGCTGAA TCAACAGGCG GTAACCGCCA GTAATCTGGC CAATGCCTCT ACGCCCGGTT TTCGCGCGCA GTTAAACGCC TTGCGCGCAG TGCCGGTGGA AGGGCTTTCA CTGCCCACGC GCACGCTGGT AACGGCGTCA ACACCGGGTG CAGACATGAC GCCCGGCAAG ATAGATTACA CCTCGCGCCC GCTGGACGTT GCGTTGCAGC AGGATGGCTG GCTGGCCGTG CAGACCGCTG ACGGCAGCGA AGGGTATACG CGTAATGGCA GCATTCAGGT TGATCCCACC GGGCAACTGA CAATTCAGGG GCATCAGGTG ATAGGCGAGG CGGGGCCAAT TGCTGTGCCG GAAGGAGCGG AAATCACTAT TGCTGCCGAT GGCACAATCT CGGCGCTCAA TCCGGGCGAT CCGGCAAATA CAGTTGCGCC AGTAGGGCGT CTGAAACTGG TGAAAGCCAC GGGCAGCGAA GTGCAGCGCG GTGACGACGG CATTTTTCGT TTAAGCGCAG AAACCCAGGC CACGCGAGGG CCGGTACTGC AGGCAGATCC AACCTTGCGT GTGATGTCGG GGGTTCTGGA AGGCAGTAAC GTCAATGCCG TTGCGGCAAT GAGCGACATG ATTGCCAGCG CGCGGCGTTT TGAAATGCAG ATGAAGGTGA TCAGCAGCGT CGATGATAAC GCAGGCCGTG CCAACCAACT GCTGTCGATG AGTTAA
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Protein sequence | MDHAIYTAMG AASQTLNQQA VTASNLANAS TPGFRAQLNA LRAVPVEGLS LPTRTLVTAS TPGADMTPGK IDYTSRPLDV ALQQDGWLAV QTADGSEGYT RNGSIQVDPT GQLTIQGHQV IGEAGPIAVP EGAEITIAAD GTISALNPGD PANTVAPVGR LKLVKATGSE VQRGDDGIFR LSAETQATRG PVLQADPTLR VMSGVLEGSN VNAVAAMSDM IASARRFEMQ MKVISSVDDN AGRANQLLSM S
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