Gene SbBS512_E2240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E2240 
Symbol 
ID6272217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp2037060 
End bp2038079 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content51% 
IMG OID641726262 
Producttransposase, IS1111 family 
Protein accessionYP_001880746 
Protein GI187732173 
COG category[L] Replication, recombination and repair 
COG ID[COG3547] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000000963569 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATATA CACCGGTTGG CGTTGATATC GCAAAACATG TCATTCAGAT TCACTTCATC 
AATGAGCACA CAGGTGAAGT GGTTGATAAA CAGTTGCGTA GACAGGATTT TCTGACGTTC
TTCGGCAACC GTGAGCCATG CCTGATTGGT ATGGAGGCCT GTGGAGGTTC TCAGCACTGG
GCACGGGAAC TGACAAAACT TGGTCATAAA GTTCGGTTGT TGCAGGCCCG CTTCGTTAAG
GCATTCGTCA TGGGCAATAA GAATGATGTG ATGGATGCCC GGGCTATCTG GATGGCGGTT
CAGCAGCCGG GTAAAGAAAT CGCCGTAAAA ACAGAAGAAC AGCAGTCGGT ACTGGTTCTG
CACCGTACCC GCATGCAACT GGTGAAGTTC CGGACCGCAC AAATTAATGC CCTGCACGGG
ACGTTACTGG AGTTTGGTGA AACCATCCAC AAAGGCCGGG CAGCGATGGA GCGGGAGTTC
CCCGAAGCAC TGGAACGGAT GAAAGAGAGA CTGCCACCGT ATCTCATTAT GGTTCTGGAA
AACCAGTACA ACCGACTGAA TGAGCTGGAC TCACTGATAG AGGATATTGA AAAACAGCTT
ACCAGCGTGG CGAGGCAGAA TGAAACCTGT AAGCGGTTGC TGGATATTCC TGGCGTTGGA
CCACTTATTG CGACGGCAGC GGTGGCCACC ATGGGGGAAG CATCAGCGTT TAAATCGGGG
CGAGAGTTCG CCGCATATGT TGGTCTGGTT CCAAAACAAA CAGGCTCCGG AGGGAAAGTA
CGTCTGCTGG GGATAAGCAA ACGTGGTGAC ACTTATCTCA GGACATTATT TATCCACGGT
GCAAGAGCGG TGGCATTAGT AGCTAAAGAG CCTGGCCCGT GGATAACCGA ACTGAAAAAA
CGTCGTCCAG CCAGTGTGGC AATCGTCGCC ATGGCAAACA AGCTGGCACG AACAGTATGG
GCGATAACCG CCCATGACCG TAAGTATGAC AGGAACCACG TCAGTATCAG ACCATATTAA
 
Protein sequence
MKYTPVGVDI AKHVIQIHFI NEHTGEVVDK QLRRQDFLTF FGNREPCLIG MEACGGSQHW 
ARELTKLGHK VRLLQARFVK AFVMGNKNDV MDARAIWMAV QQPGKEIAVK TEEQQSVLVL
HRTRMQLVKF RTAQINALHG TLLEFGETIH KGRAAMEREF PEALERMKER LPPYLIMVLE
NQYNRLNELD SLIEDIEKQL TSVARQNETC KRLLDIPGVG PLIATAAVAT MGEASAFKSG
REFAAYVGLV PKQTGSGGKV RLLGISKRGD TYLRTLFIHG ARAVALVAKE PGPWITELKK
RRPASVAIVA MANKLARTVW AITAHDRKYD RNHVSIRPY