Gene SbBS512_E2228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E2228 
SymbolpabC 
ID6270652 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp2027606 
End bp2028415 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content50% 
IMG OID641726249 
Product4-amino-4-deoxychorismate lyase 
Protein accessionYP_001880734 
Protein GI187733311 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 
TIGRFAM ID[TIGR03461] aminodeoxychorismate lyase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000140571 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCTTAA TTAACGGTCA TAAGCAGGAA TCGCTGGCAG TAAGCGATCG GGCAACGCAG 
TTTGGTGATG GTTGTTTTAC CACCGCCAGA GTTATCGACG GTAAAGTCAG TTTGTTATCG
GCGCATATCC AGCGACTACA GGATGCTTGT CAGCGGTTGA TGATTTTCTG TGACTTCTGG
CCTCAGCTTG AACAAGAGAT GAAAACGCTG GCAGCAGAAC AGCAAAATGG TGTGCTGAAA
GTCGTGATCA GTCGCGGTAG TGGCGGGCGA GGGTACAGCA CATTGAACAG TGGACCGGCA
ACGCGGATTC TCTCCATTAC GGTTTATCCT GCACATTACG ACCGTTTGCG TAACGAAGGG
ATGACGTTGG CGCTAAGCCC GGTGCGGCTG GGGCGCAATC CCCATCTTGC AGGTATTAAA
CATCTTAATC GGCTTGAGCA AGTATTGATC CGCTCTCATC TTGAGCAGAC AAACGCTGAT
GAGGCGCTGG TCCTTGACAG CGAAGGGTGG GTTACGGAAT GCTGTGCGGC TAATTTGTTC
TGGCGGAAGA GCAATGTAGT TTATACGCCG CGACTGGATC AGGCAGGTGT TAACGGCATT
ATGCGACAAT TCTGTATCCG TTTGCTGGCA CAATCCTCTT ATCAGCTTGT CGAAGTGCAA
GCCTCTCTGG AAGAGGCGTT GCAGGCAGAT GAGATGGTTA TTTGTAATGC GTTAATGCCA
GTGATGCCCG TACGTGCCTG TGGCGATGTC TCCTTTTCGT CAGCAACGTT ATATGAATAT
TTAGCCCCAC TTTGTGAGCG CCCGAATTAG
 
Protein sequence
MFLINGHKQE SLAVSDRATQ FGDGCFTTAR VIDGKVSLLS AHIQRLQDAC QRLMIFCDFW 
PQLEQEMKTL AAEQQNGVLK VVISRGSGGR GYSTLNSGPA TRILSITVYP AHYDRLRNEG
MTLALSPVRL GRNPHLAGIK HLNRLEQVLI RSHLEQTNAD EALVLDSEGW VTECCAANLF
WRKSNVVYTP RLDQAGVNGI MRQFCIRLLA QSSYQLVEVQ ASLEEALQAD EMVICNALMP
VMPVRACGDV SFSSATLYEY LAPLCERPN