Gene SbBS512_E2222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E2222 
SymbolfhuE 
ID6269607 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp2020164 
End bp2022353 
Gene Length2190 bp 
Protein Length729 aa 
Translation table11 
GC content50% 
IMG OID641726243 
Productferric-rhodotorulic acid outer membrane transporter 
Protein accessionYP_001880728 
Protein GI187731717 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid 
TIGRFAM ID[TIGR01783] TonB-dependent siderophore receptor 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0115447 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTTCAA CACAATTTAA CAGGGATAAT CAATATCAAG CCATCACCAA ACCGTCACTA 
CTTGCCGGTT GCATAGCACT GGCACTATTA CCTTCTGCCG CTTTTGCTGC ACCAGCCACT
GAAGAAACGG TGATTGTTGA GGGTTCAGCC ACAGCTCCAG ATGATGGCGA AAATGATTAC
AGCGTAACGT CTACCTCTGC GGGTACCAAA ATGCAGATGA CTCAACGTGA TATTCCTCAG
TCGGTCACTA TTATTAGCCA GCAGCGGATG GAAGATCAGC AGTTACAAAC GCTGGGCGAA
GTGATGGAAA ACACGCTGGG GATCAGCAAA AGTCAGGCGG ATTCCGATCG TGCTCTTTAT
TATTCCCGCG GATTCCAGAT CGATAACTAT ATGGTTGATG GTATCCCCAC CTATTTTGAA
TCGCGCTGGA ATCTGGGCGA TGCACTTTCT GATATGGCAC TGTTTGAACG CGTAGAAGTA
GTGCGTGGCG CGACAGGACT CATGACCGGG ACGGGTAATC CATCTGCGGC AATTGATATG
GTTCGAAAAC ACGCGACCAG TCGTGAATTT AAAGGCGATG TCTCGGCGGA ATACGGTAGC
TGGAACAAAG AACGGTATGT GGCGGATTTA CAAAGCCCAC TCACCGAAGA CGGTAAAATC
CGCGCGCGAA TTGTCGGCGG CTACCAGAAT AACGACTCAT GGCTGGACCG CTACAACAGT
GAAAAGACCT TCTTCTCCGG CATTGTCGAT GCTGATTTAG GCGATCTTAC GACGCTTTCA
GCCGGTTACG AATATCAGCG CATTGATGTT AATAGCCCTA CCTGGGGCGG TTTACCGCGC
TGGAATACTG ATGGCAGCAG CAACAGTTAC GATCGTGCAC GCAGTACCGC ACCTGACTGG
GCGTACAACG ATAAAGAGAT CAACAAGGTC TTTATGACCC TGAAGCAGCG GTTTGCTGAT
ACCTGGCAAG CGACACTGAA TGCCACCCAC TCTGAAGTCG AATTTGACAG CAAAATGATG
TATGTCGATG CCTATGTAAA CAAAGCGGAT GGTATGCTGG TTGGGCCATA CAGTAATTAT
GGACCTGGCT TTGATTATGT CGGCGGCACC GGTTGGAACA GTGGCAAACG TAAAGTTGAT
GCGCTGGATT TGTTCGCTGA CGGTAGTTAT GAATTGTTTG GTCGTCAGCA CAATCTAATG
TTTGGTGGCA GTTACAGCAA ACAAAACAAT CGTTACTTCA GTTCATGGGC CAACATCTTC
CCGGATGAAA TTGGCAGTTT CTACAACTTT AATGGCAATT TCCCACAAAC CGACTGGTCA
CCACAGAGCC TGGCACAGGA CGATACCACA CATATGAAAT CGTTATATGC TGCCACTCGA
GTCACCCTTG CCGATCCGCT GCATCTGATC CTCGGCGCAC GTTATACCAA CTGGCGGGTT
GATACGCTGA CTTACAGCAT GGAGAAAAAC CACACCACGC CTTACGCTGG TCTGGTGTTT
GACATCAATG ACAACTGGTC GACCTACGCC AGCTATACCT CTATTTTCCA GCCGCAAAAT
GATCGTGACA GTTCAGGCAA ATATCTGGCT CCAATCACCG GTAACAACTA CGAGCTGGGT
CTGAAATCGG ACTGGATGAA TAGCCGTCTG ACCACCACGT TAGCCATCTT CCGTATTGAG
CAGGATAATG TCGCTCAGTC CACCGGTACA CCTATCCCCG GCAGCAACGG CGAAACCGCC
TATAAAGCGG TGGATGGGAC AGTCAGTAAA GGGGTGGAAT TTGAACTCAA CGGCGCAATT
ACCGACAACT GGCAGCTGAC ATTTGGCGCA ACGCGCTATA TTGCAGAGGA TAACGAAGGA
AACGCCGTTA ATCCTAATCT GCCACGCACC ACGGTTAAAA TGTTCACCAG CTATCGGTTG
CCTGTCATGC CAGAGTTGAC AGTCGGCGGT GGTGTTAACT GGCAAAATCG CGTGTATACC
GACACCGTGA CACCGTATGG CACCTTCCGC GCCGAGCAAG GTAGCTACGC GCTGGTGGAT
CTCTTCACCC GCTACCAGGT GACGAAAAAC TTCTCGTTAC AGGGGAACGT CAATAACCTG
TTCGACAAAA CCTACGATAC CAACATGGAA GGTTCTATCG TCTACGGCGC ACCGCGTAAT
TTCAGCATTA CCGGCACGTA TCAATTCTGA
 
Protein sequence
MLSTQFNRDN QYQAITKPSL LAGCIALALL PSAAFAAPAT EETVIVEGSA TAPDDGENDY 
SVTSTSAGTK MQMTQRDIPQ SVTIISQQRM EDQQLQTLGE VMENTLGISK SQADSDRALY
YSRGFQIDNY MVDGIPTYFE SRWNLGDALS DMALFERVEV VRGATGLMTG TGNPSAAIDM
VRKHATSREF KGDVSAEYGS WNKERYVADL QSPLTEDGKI RARIVGGYQN NDSWLDRYNS
EKTFFSGIVD ADLGDLTTLS AGYEYQRIDV NSPTWGGLPR WNTDGSSNSY DRARSTAPDW
AYNDKEINKV FMTLKQRFAD TWQATLNATH SEVEFDSKMM YVDAYVNKAD GMLVGPYSNY
GPGFDYVGGT GWNSGKRKVD ALDLFADGSY ELFGRQHNLM FGGSYSKQNN RYFSSWANIF
PDEIGSFYNF NGNFPQTDWS PQSLAQDDTT HMKSLYAATR VTLADPLHLI LGARYTNWRV
DTLTYSMEKN HTTPYAGLVF DINDNWSTYA SYTSIFQPQN DRDSSGKYLA PITGNNYELG
LKSDWMNSRL TTTLAIFRIE QDNVAQSTGT PIPGSNGETA YKAVDGTVSK GVEFELNGAI
TDNWQLTFGA TRYIAEDNEG NAVNPNLPRT TVKMFTSYRL PVMPELTVGG GVNWQNRVYT
DTVTPYGTFR AEQGSYALVD LFTRYQVTKN FSLQGNVNNL FDKTYDTNME GSIVYGAPRN
FSITGTYQF