Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E2185 |
Symbol | |
ID | 6272056 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 1989015 |
End bp | 1989593 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641726211 |
Product | putative antirepressor protein encoded by prophage CP-933N |
Protein accession | YP_001880699 |
Protein GI | 187732643 |
COG category | [K] Transcription |
COG ID | [COG3617] Prophage antirepressor |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.0690247 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAAA ATATTGCCGT GACGGGCAAG GGGTACGCTC GTCCAGTGAA AAAATTCTGC GATATTCGTG ATCTCGTCGT TCTGCGCTTT GATAGTGTGA ACGTTCGTGT GGTGTATCTG AACGGCGATC CGTGGTTTGT TGCAAAAGAT GTTTGTGCTG CGCTGGAACT AACCAATTCG CGTACGGCGT TGCAGATGCT TGATGATGAT GAAAAGGGAG TAAATTTAAC TTACACCCCA GGAGGAAATC AGAATATGAG AATTATCTCT GAGTCAGGTT TCTACAAACT AATAGCCCGC AGCCGCAAAG CAACGACGCC TGGCACATTT GCTCATCGTT TCAGTAACTG GGTATTCAGA AATGTGATAC CAGGTATCAG AAAAACGGGG ACTTATGGTA TCCCGTGGGG TGCATTACAG GATTTTTCCC GCCGTAAAGA GCAATATCAA ATAAGTGCCA GCGAGAAGGG GAGGGAGCTA CAGGCATGTA AGCGCAAAAA GCGTGAGCAG GAGGAAGAAG AAAAAACGCT GATACGTGAA TATCAGCCTG AGTTTTACTT TGGTAACCGC ATTCAGTGA
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Protein sequence | MNKNIAVTGK GYARPVKKFC DIRDLVVLRF DSVNVRVVYL NGDPWFVAKD VCAALELTNS RTALQMLDDD EKGVNLTYTP GGNQNMRIIS ESGFYKLIAR SRKATTPGTF AHRFSNWVFR NVIPGIRKTG TYGIPWGALQ DFSRRKEQYQ ISASEKGREL QACKRKKREQ EEEEKTLIRE YQPEFYFGNR IQ
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