Gene SbBS512_E2185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E2185 
Symbol 
ID6272056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp1989015 
End bp1989593 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content46% 
IMG OID641726211 
Productputative antirepressor protein encoded by prophage CP-933N 
Protein accessionYP_001880699 
Protein GI187732643 
COG category[K] Transcription 
COG ID[COG3617] Prophage antirepressor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.0690247 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAA ATATTGCCGT GACGGGCAAG GGGTACGCTC GTCCAGTGAA AAAATTCTGC 
GATATTCGTG ATCTCGTCGT TCTGCGCTTT GATAGTGTGA ACGTTCGTGT GGTGTATCTG
AACGGCGATC CGTGGTTTGT TGCAAAAGAT GTTTGTGCTG CGCTGGAACT AACCAATTCG
CGTACGGCGT TGCAGATGCT TGATGATGAT GAAAAGGGAG TAAATTTAAC TTACACCCCA
GGAGGAAATC AGAATATGAG AATTATCTCT GAGTCAGGTT TCTACAAACT AATAGCCCGC
AGCCGCAAAG CAACGACGCC TGGCACATTT GCTCATCGTT TCAGTAACTG GGTATTCAGA
AATGTGATAC CAGGTATCAG AAAAACGGGG ACTTATGGTA TCCCGTGGGG TGCATTACAG
GATTTTTCCC GCCGTAAAGA GCAATATCAA ATAAGTGCCA GCGAGAAGGG GAGGGAGCTA
CAGGCATGTA AGCGCAAAAA GCGTGAGCAG GAGGAAGAAG AAAAAACGCT GATACGTGAA
TATCAGCCTG AGTTTTACTT TGGTAACCGC ATTCAGTGA
 
Protein sequence
MNKNIAVTGK GYARPVKKFC DIRDLVVLRF DSVNVRVVYL NGDPWFVAKD VCAALELTNS 
RTALQMLDDD EKGVNLTYTP GGNQNMRIIS ESGFYKLIAR SRKATTPGTF AHRFSNWVFR
NVIPGIRKTG TYGIPWGALQ DFSRRKEQYQ ISASEKGREL QACKRKKREQ EEEEKTLIRE
YQPEFYFGNR IQ