Gene SbBS512_E2129 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E2129 
Symbol 
ID6268869 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp1937464 
End bp1938333 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content49% 
IMG OID641726164 
ProductDNA-binding transcriptional regulator HexR 
Protein accessionYP_001880656 
Protein GI187733824 
COG category[K] Transcription 
COG ID[COG1737] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATGC TGGAAAAAAT CCAGTCTCAG CTGGAACATT TGAGCAAATC AGAGCGCAAA 
GTTGCCGAGG TCATTCTGGC TTCGCCCGAT AACGCGATCC ATTCGAGTAT TGCTGCTATG
GCACTGGAAG CCAATGTTAG CGAACCGACG GTGAATCGTT TCTGTCGCAG CATGGACACG
CGCGGTTTTC CTGATTTTAA ACTTCATCTG GCACAGAGTC TGGCGAATGG CACTCCCTAT
GTTAATCGCA ATGTCAATGA AGATGACAGC GTTGAATCAT ACACAGGGAA AATATTTGAG
TCCGCAATGG CAACGCTTGA TCATGTCCGT CATTCACTGG ATAAATCTGC CATCAACCGC
GCCGTCGACT TGCTCACTCA GGCAAAAAAA ATCGCCTTTT TCGGATTAGG CTCTTCAGCC
GCCGTTGCCC ACGATGCGAT GAATAAGTTC TTTCGTTTTA ATGTTCCGGT GGTGTACTCC
GATGATATCG TGCTGCAACG CATGAGTTGT ATGAATTGTA GCGACGGAGA CGTGGTGGTG
CTGATTTCTC ACACTGGAAG AACAAAAAAT CTGGTCAAGC TGGCGCAGCT GGCTCGCGAA
AACGACGCAA TGGTGATTGC CCTCACCTCT GCGGGTACCC CGCTCGCCCG GGAAGCAACG
CTGGCAATTA CCCTCGACGT ACCGGAAGAT ACTGACATTT ATATGCCCAT GGTTTCTCGA
CTTGCACAGC TGACCGTGAT AGATGTGCTG GCGACAGGAT TTACTTTGCG ACGCGGTGCA
AAATTCAGAG ATAACTTGAA GCGGGTCAAG GAAGCGCTGA AGGAATCGCG TTTTGATAAG
CAGTTACTTA ATTTAAGTGA CGATCGCTAA
 
Protein sequence
MNMLEKIQSQ LEHLSKSERK VAEVILASPD NAIHSSIAAM ALEANVSEPT VNRFCRSMDT 
RGFPDFKLHL AQSLANGTPY VNRNVNEDDS VESYTGKIFE SAMATLDHVR HSLDKSAINR
AVDLLTQAKK IAFFGLGSSA AVAHDAMNKF FRFNVPVVYS DDIVLQRMSC MNCSDGDVVV
LISHTGRTKN LVKLAQLARE NDAMVIALTS AGTPLAREAT LAITLDVPED TDIYMPMVSR
LAQLTVIDVL ATGFTLRRGA KFRDNLKRVK EALKESRFDK QLLNLSDDR