Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E2089 |
Symbol | cspC |
ID | 6270576 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 1899498 |
End bp | 1899707 |
Gene Length | 210 bp |
Protein Length | 69 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641726126 |
Product | cold shock-like protein CspC |
Protein accession | YP_001880620 |
Protein GI | 187733001 |
COG category | [K] Transcription |
COG ID | [COG1278] Cold shock proteins |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 2.57783e-17 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCAAAGA TTAAAGGTCA GGTAAAGTGG TTCAACGAGT CTAAAGGTTT TGGCTTCATT ACTCCGGCTG ATGGCAGCAA AGACGTGTTC GTACACTTCT CCGCTATCCA GGGTAATGGC TTCAAAACTC TGGCTGAAGG TCAGAACGTT GAGTTCGAAA TTCAGGACGG CCAGAAAGGT CCGGCAGCTG TTAACGTAAC AGCTATCTGA
|
Protein sequence | MAKIKGQVKW FNESKGFGFI TPADGSKDVF VHFSAIQGNG FKTLAEGQNV EFEIQDGQKG PAAVNVTAI
|
| |