Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E2087 |
Symbol | rrmA |
ID | 6270927 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 1898523 |
End bp | 1899332 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641726125 |
Product | 23S rRNA methyltransferase A |
Protein accession | YP_001880619 |
Protein GI | 187730663 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000000000369097 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCTTTTT CCTGTCCACT TTGCCATCAG CCTCTTTCGC GTGAAAAAAA CAGCTATATC TGTCCCCAGC GACATCAGTT TGATATGGCG AAAGAAGGGT ATGTCAATCT GCTGCCCGTT CAGCATAAAC GGTCTCGTGA TCCGGGCGAC AGCGCGGAAA TGATGCAAGC ACGCCGCGCA TTCTTAGATG CCGGACATTA TCAGCCGCTG CGTGATGCAA TTGTCGCCCA ACTGAGGGAA CGGCTTGATG ATAAGGCCAC GGCGGTGCTG GATATTGGCT GTGGTGAAGG GTATTACACA CACGCATTTG CCGATGCGTT GCCCGAAATC ACCACGTTTG GTCTGGATGT TTCGAAGGTA GCGATAAAAG CGGCGGCGAA ACGCTATCCG CAGGTCACTT TTTGTGTCGC TTCCAGCCAC CGTTTGCCGT TTTCCGATAC CAGTATGGAC GCCATAATAC GTATTTACGC GCCGTGTAAA GCAGAAGAAT TAGCACGAGT AGTGAAGCCC GGCGGCTGGG TCATTACTGC CACGCCGGGA CCGCGACATT TGATGGAGCT GAAGGGGCTG ATTTACAATG AAGTACATCT TCATGCACCT CATGCAGAAC AACTGGAAGG TTTTACATTA CAGCAGAGTG CGGAGTTGTG TTATCCGATG CGTCTTCGCG GTGATGAAGC CGTCGCATTA TTGCAGATGA CGCCGTTTGC CTGGCGTGCG AAGCCAGAAG TCTGGCAAAC ACTGGCAGCA AAAGAAGTGT TCGACTGCCA GACGGACTTT AATATTCACC TCTGGCAGCG TTCTTATTAA
|
Protein sequence | MSFSCPLCHQ PLSREKNSYI CPQRHQFDMA KEGYVNLLPV QHKRSRDPGD SAEMMQARRA FLDAGHYQPL RDAIVAQLRE RLDDKATAVL DIGCGEGYYT HAFADALPEI TTFGLDVSKV AIKAAAKRYP QVTFCVASSH RLPFSDTSMD AIIRIYAPCK AEELARVVKP GGWVITATPG PRHLMELKGL IYNEVHLHAP HAEQLEGFTL QQSAELCYPM RLRGDEAVAL LQMTPFAWRA KPEVWQTLAA KEVFDCQTDF NIHLWQRSY
|
| |