| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E2084 |
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| Symbol | manY |
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| ID | 6271322 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 1895355 |
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| End bp | 1896155 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641726121 |
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| Product | PTS system, mannose-specific IIC component |
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| Protein accession | YP_001880615 |
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| Protein GI | 187733537 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3715] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC |
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| TIGRFAM ID | [TIGR00822] PTS system, mannose/fructose/sorbose family, IIC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000000130007 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAGATTA CCACTCTTCA AATTGTGCTG GTATTTATCG TAGCCTGTAT CGCAGGTATG
GGATCAATCC TCGATGAATT TCAGTTTCAC CGTCCGCTAA TCGCGTGTAC CCTGGTGGGT
ATCGTTCTTG GGGATATGAA AACCGGTATT ATTATCGGTG GTACGCTGGA AATGATCGCG
CTGGGCTGGA TGAACATCGG TGCTGCAGTT GCGCCTGACG CCGCTCTGGC TTCTATCATT
TCTACCATTC TGGTTATCGC AGGTCATCAG AGCATTGGTG CAGGTATCGC ACTGGCAATC
CCTCTGGCCG CTGCGGGCCA GGTACTGACC ATCATCGTTC GTACTATTAC CGTTGCTTTC
CAGCACGCTG CGGATAAGGC TGCTGATAAC GGCAACCTGA CAGCGATTTC CTGGATCCAC
GTTTCTTCTC TGTTCCTGCA AGCAATGCGT GTGGCTATTC CGGCCGTCAT CGTTGCGCTG
TCTGTTGGTA CCAGCGAAGT ACAGAACATG CTGAATGCGA TTCCGGAAGT GGTGACCAAT
GGTCTGAATA TCGCCGGTGG CATGATCGTG GTGGTTGGTT ATGCGATGGT TATCAACATG
ATGCGTGCTG GCTACCTGAT GCCGTTCTTC TACCTCGGCT TCGTAACCGC AGCATTCACC
AACTTTAACC TGGTTGCTCT GGGTGTGATC GGTACTGTTA TGGCAGTGCT CTACATCCAA
CTTAGCCCGA AATACAACCG CGTAGCCGGT GCGCCTGCTC AGGCTGCTGG TAACAACGAT
CTCGATAATG AACTGGACTA A
|
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| Protein sequence | MEITTLQIVL VFIVACIAGM GSILDEFQFH RPLIACTLVG IVLGDMKTGI IIGGTLEMIA
LGWMNIGAAV APDAALASII STILVIAGHQ SIGAGIALAI PLAAAGQVLT IIVRTITVAF
QHAADKAADN GNLTAISWIH VSSLFLQAMR VAIPAVIVAL SVGTSEVQNM LNAIPEVVTN
GLNIAGGMIV VVGYAMVINM MRAGYLMPFF YLGFVTAAFT NFNLVALGVI GTVMAVLYIQ
LSPKYNRVAG APAQAAGNND LDNELD
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