| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E2067 |
|---|
| Symbol | |
|---|
| ID | 6273167 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | - |
|---|
| Start bp | 1879665 |
|---|
| End bp | 1880360 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641726105 |
|---|
| Product | glycoprotease family protein |
|---|
| Protein accession | YP_001880599 |
|---|
| Protein GI | 187732268 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1214] Inactive homolog of metal-dependent proteases, putative molecular chaperone |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 50 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGAATTC TGGCTATCGA TACCGCGACA GAGGCCTGCT CTGTCGCCCT GTGGAACGAC
GGTACTGTCA ACGCTCATTT TGAGCTTTGC CCTCGTGAAC ATACTCAACG AATCTTACCG
ATGGTGCAGG ATATCCTGAC CACCAGCGGA ACTTCCCTGA CTGATATTAA CGCTCTGGCT
TACGGGCGCG GCCCCGGTAG CTTTACCGGC GTGCGCATTG GTATTGGCAT TGCGCAAGGG
CTGGCACTTG GCGCAGAGCT GCCGATGATT GGCGTCTCCA CGCTAATGAC AATGGCGCAA
GGGGCGTGGC GCAAAAACGG CGCAACCCGC GTGCTGGCTG CCATTGATGC GCGGATGGGC
GAAGTTTACT GGGCCGAATA TCAGCGTGAT GAAAACGGTA TCTGGCGCGG TGAAGAAACC
GAAGCCGTAC TCAAACCCGA ACTCGTTCAT GAACGAATGC AACAGCTTTC CGGCGAATGG
GTAACGGTAG GGACGGGCTG GCAAGCCTGG CCGGATCTCG GTAAAGAGAG CGGGCTGGTT
TTGCGCGACG GAGAAGTTTT ACTGCCAGCG ACGGAAGATA TGCTGCCGAT TGCGTGTCAG
ATATTTGCCG AGGGTAAAAC GGTGGCGGTG GAACATGCCG AACCGGTTTA TTTACGTAAC
AACGTCGCAT GGAAGAAACT TCCGGGCAAA GAATGA
|
|---|
| Protein sequence | MRILAIDTAT EACSVALWND GTVNAHFELC PREHTQRILP MVQDILTTSG TSLTDINALA
YGRGPGSFTG VRIGIGIAQG LALGAELPMI GVSTLMTMAQ GAWRKNGATR VLAAIDARMG
EVYWAEYQRD ENGIWRGEET EAVLKPELVH ERMQQLSGEW VTVGTGWQAW PDLGKESGLV
LRDGEVLLPA TEDMLPIACQ IFAEGKTVAV EHAEPVYLRN NVAWKKLPGK E
|
|---|
| |