Gene SbBS512_E2065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E2065 
SymbolfadD 
ID6269670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp1877154 
End bp1878839 
Gene Length1686 bp 
Protein Length561 aa 
Translation table11 
GC content51% 
IMG OID641726103 
Productlong-chain-fatty-acid--CoA ligase 
Protein accessionYP_001880597 
Protein GI187733670 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAGAAGG TTTGGCTTAA CCGTTATCCC GCGGACGTTC CGACGGAGAT CAACCCTGAC 
CGTTATCAAT CTCTGGTAGA TATGTTTGAG CAGTCGGTCG CGCGCTACGC CGATCAGCCT
GCGTTTGTGA ATATGGGGGA GGTGATGACC TTCCGCAAGC TGGAAGAACG CAGTCGCGCG
TTTGCCGCTT ATTTGCAACA AGGGTTGGGG CTGAAGAAAG GCGATCGCGT TGCGTTGATG
ATGCCTAATT TATTGCAATA TCCGGTGGCG CTGTTTGGCA TTTTGCGTGC CGGGATGATC
GTCGTAAACG TTAACCCGTT GTATACCCCG CGTGAGCTTG AGCATCAGCT TAACGATAGC
GGCGCATCGG CGATTGTTAT CGTGTCTAAC TTTGCTCACA CACTGGAAAA AGTGGTTGAT
AAAACCGCCG TTCAGCACGT AATTCTGACC CGTATGGGCG ATCAGCTATC TACGGCAAAA
GGCACGGTAG TCAATTTCGT TGTTAAATAC ATCAAGCGTT TGGTGCCGAA ATACCATCTG
CCAGATGCCA TTTCATTTCG TAGCGCACTG CATAACGGCT ACCGGATGCA GTACGTCAAA
CCCGAACTGG TGCCGGAAGA TTTAGCCTTC CTGCAATACA CCGGCGGCAC CACAGGTGTG
GCGAAAGGCG CGATGCTGAC TCACCGCAAT ATGCTGGCGA ACCTGGAACA GGTCAACGCC
ACCTATGGGC CGTTGCTGCA TCCAGGTAAA GAACTGGTAG TAACGGCACT GCCGCTGTAT
CACATTTTTG CCCTGACCAT TAACTGCCTG CTGTTTATCG AACTGGGTGG GCAGAACCTG
CTTATCACTA ACCCGCGTGA TATTCCAGGG TTGGTAAAAG AGTTAGCGAA ATATCCGTTT
ACCGCTATCA CTGGCGTTAA CACCTTGTTC AATGCGTTGC TGAACAATAA AGAGTTCCAG
CAGCTGGATT TCTCCAGTCT GCATCTTTCC GCAGGCGGTG GGATGCCAGT GCAGCAAGTG
GTGGCAGAGC GTTGGGTGAA ACTGACCGGA CAGTATCTGC TGGAAGGCTA TGGCCTTACC
GAGTGTGCGC CGCTGGTCAG CGTTAACCCA TATGATATTG ATTATCATAG TGGTAGCATC
GGTTTGCCGG TGCCGTCGAC GGAAGCCAAA CTGGTGGATG ATGATGATAA TGAAGTACCA
CCAGGTCAAC CGGGTGAGCT TTGTGTCAAA GGACCGCAGG TGATGCTGGG TTACTGGCAG
CGTCCCGATG CTACCGATGA AATCATCAAA AATGGCTGGT TACACACCGG CGACATCGCG
GTAATGGATG AAGAAGGATT CCTGCGCATT GTCGATCGTA AAAAAGACAT GATTCTGGTT
TCCGGTTTTA ACGTCTATCC CAACGAGATT GAAGATGTCG TCATGCAGCA TCCTGGCGTA
CAGGAAGTCG CGGCTGTTGG CGTACCTTCC GGCTCCAGTG GTGAAACGGT GAAAATCTTC
GTAGTGAAAA AAGATCCATC GCTTACCGAA GAGTCACTGG TGACTTTTTG CCGCCGTCAG
CTCACGGGAT ACAAAGTACC GAAGCTGGTG GAGTTTCGTG ATGAGTTACC GAAATCTAAC
GTCGGAAAAA TTTTGCGACG AGAATTACGT GACGAAGCGC GCGGCAAAGT GGACAATAAA
GCCTGA
 
Protein sequence
MKKVWLNRYP ADVPTEINPD RYQSLVDMFE QSVARYADQP AFVNMGEVMT FRKLEERSRA 
FAAYLQQGLG LKKGDRVALM MPNLLQYPVA LFGILRAGMI VVNVNPLYTP RELEHQLNDS
GASAIVIVSN FAHTLEKVVD KTAVQHVILT RMGDQLSTAK GTVVNFVVKY IKRLVPKYHL
PDAISFRSAL HNGYRMQYVK PELVPEDLAF LQYTGGTTGV AKGAMLTHRN MLANLEQVNA
TYGPLLHPGK ELVVTALPLY HIFALTINCL LFIELGGQNL LITNPRDIPG LVKELAKYPF
TAITGVNTLF NALLNNKEFQ QLDFSSLHLS AGGGMPVQQV VAERWVKLTG QYLLEGYGLT
ECAPLVSVNP YDIDYHSGSI GLPVPSTEAK LVDDDDNEVP PGQPGELCVK GPQVMLGYWQ
RPDATDEIIK NGWLHTGDIA VMDEEGFLRI VDRKKDMILV SGFNVYPNEI EDVVMQHPGV
QEVAAVGVPS GSSGETVKIF VVKKDPSLTE ESLVTFCRRQ LTGYKVPKLV EFRDELPKSN
VGKILRRELR DEARGKVDNK A