| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E2033 |
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| Symbol | |
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| ID | 6270948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 1854056 |
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| End bp | 1855531 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 641726080 |
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| Product | diguanylate cyclase (GGDEF) domain protein |
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| Protein accession | YP_001880574 |
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| Protein GI | 187731228 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTCAGT CAACACGTAT TTCCATGGGG TTATTCTTTA AATATTTTTT ATCGTTGACG
AAAATTGATC CTGGTCAAAA CTATATATCT CTGCCATCAA TAAAATCCAG CACTCACATT
GCTCTCCTTT TTATGGTTTC TATGGGTACA CAAAAATTAA AAGCTCAAAG CTTTTTTATT
TTCAGTTTAT TGCTGACATT AATTTTATTT TGCATTACTA CCTTATATAA CGAAAACACA
AATGTAAAAC TCATCCCACA GATGAATTAC CTGATGGTTG TTGTGGCTTT GTTTTTCCTT
AACGCCGTCA TTTTTCTTTT CATGTTAATG AAATATTTCA CTAACAAACA AATTTTACCA
ACACTCATTT TAAGCCTTGC ATTCTTAAGT GGCCTTATCT ATTTAGTTGA AACCATTGTA
ATTATCCATA AACCAATTAA CGGCAGTACA CTGATCCAGA CAAAGTCGAA TGATGTTTCT
ATTTTCTATA TTTTCCGCCA ACTCAGTTTT ATTTGTTTAA CCTCGCTGGC ACTCTTTTGT
TATGGAAAAG ACAACATCCT TGACAACAAT AAGAAAAAAA CGGGAATCCT GTTGCTGGCG
TTGATTCCTT TTTTAGTTTT TCCCCTTCTG GCACACAATC TGAGCAGTTA TAACGCTGAC
TATTCTTTGT ATGTCGTCGA CTACTGTCCG GACAACCATA CTGCGACCAG GGGAATCAAC
TATACAAAAA TATTGGTTTG TCTGTGGGCA TTTTTACTGT TCTTTATTAT CATGCGTACA
CGATTAGCCA GCGAACTATG GCCGTTAATA GCATTATTAT GTCTGGCATC GCTATGCTGC
AACTTACTTC TACTGACTCT GGATGAGTAT AATTACACCA TCTGGTATAT CAGTCGCGGG
ATTGAAGTTT CCAGTAAACT GTTTGTTGTG TCTTTTCTGA TTTATAACAT TTTTCAGGAG
CTGCAACTCT CCAGCAAACT GGCAGTTCAT GATGTGCTGA CCAATATTTA TAATCGGCGC
TACTTTTTCA ACAGCGTAGA GTCATTATTG TCGCGACCTG TTGTTAAGGA CTTCTGTGTC
ATGCTGGTTG ATATTAATCA GTTCAAACGC ATCAATGCCC AATGGGGACA TCGTGTGGGT
GATAAAGTGC TGGTTTCAAT TGTCGATATT ATCCAGCAAA GCATCCGCCC TGATGATATT
TTAGCGCGAC TGGAGGGTGA GGTGTTTGGC TTGCTATTTA CCGAACTCAA TAGTGCCCAG
GCAAAAATCA TTGCGGATCG TATACGTAAA AATGTCGAAC TCCTGACCGG CTTTAGTAAC
AGATATGATG TTCCTGAACA AATGACCATC AGTATTGGCA CGGTTTTTTC AACGGGTGAC
ACGCGTAATA TCTCGCTTGT CATGACGGAA GCAGATAAAG CCTTACGCGA AGCGAAAAGC
GAGGGGGGCA ACAAAGTGAT TATTCATCAT ATTTAA
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| Protein sequence | MIQSTRISMG LFFKYFLSLT KIDPGQNYIS LPSIKSSTHI ALLFMVSMGT QKLKAQSFFI
FSLLLTLILF CITTLYNENT NVKLIPQMNY LMVVVALFFL NAVIFLFMLM KYFTNKQILP
TLILSLAFLS GLIYLVETIV IIHKPINGST LIQTKSNDVS IFYIFRQLSF ICLTSLALFC
YGKDNILDNN KKKTGILLLA LIPFLVFPLL AHNLSSYNAD YSLYVVDYCP DNHTATRGIN
YTKILVCLWA FLLFFIIMRT RLASELWPLI ALLCLASLCC NLLLLTLDEY NYTIWYISRG
IEVSSKLFVV SFLIYNIFQE LQLSSKLAVH DVLTNIYNRR YFFNSVESLL SRPVVKDFCV
MLVDINQFKR INAQWGHRVG DKVLVSIVDI IQQSIRPDDI LARLEGEVFG LLFTELNSAQ
AKIIADRIRK NVELLTGFSN RYDVPEQMTI SIGTVFSTGD TRNISLVMTE ADKALREAKS
EGGNKVIIHH I
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