Gene SbBS512_E2028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E2028 
Symbol 
ID6273164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp1847498 
End bp1848403 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content50% 
IMG OID641726076 
Productaldose 1-epimerase family protein 
Protein accessionYP_001880570 
Protein GI187730598 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0676] Uncharacterized enzymes related to aldose 1-epimerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.0695948 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTTAA AGGACTGCGT CATGATTAAG AAAATTTTTG CCCTTCCGGT CATCGAACAA 
ATCTCCCCTG TCCTCTCCCG TCGTAAACTG GATGAACTGG ACCTCATTGT GGTCGATCAT
CCCCAGGTAA AAGCCTCTTT TGCATTACAG GGCGCACACC TTCTCTCGTG GAAACCTGCG
GGTGAAGAAG AAGTTCTGTG GTTGAGCAAC AACACACCGT TCAAAAATGG CGTCGCTATT
CGCGGTGGCG TACCGGTTTG CTGGCCGTGG TTTGGTCCGG CGGCACAACA AGGTCTGCCT
GCGCACGGTT TTGCCCGCAA CCTGCCGTGG ACGCTGAAAT CACATCATGA AGATGCTGAT
GGCGTAGCGC TGACTTTTGA ATTGACGCAA AGCGAAGAGA CGAAAAAATT CTGTCCGCAC
GACTTTACGC TGTTAGCGCA TTTCCGCGTG GGTAAAACCT GTGAAATCGA TCTTGAATCA
CATGGCGAAT TTGAAACCAC CTCTGCCCTG CATACCTACT TTAACGTGGG TGATATCGCT
AAGGTAAGCG TCAGTGGGCT GGGCGATCGC TTCATTGATA AAGTGAATGA CGCGAAAGAA
GATGTACTGA CCGACGGTAT TCAGACCTTC CCTGACCGTA CCGATCGCGT GTATCTGAAT
CCGCAAGATT GCAGCGTGAT TAATGATGAA GCGCTGAATC GTATTATCGC CGTAGGCCAC
CAGCATCATC TGAACGTTGT AGGCTGGAAC CCGGGACCGG CGCTTTCAAT TAGTATGGGC
GATATGCCGG ATGATGGCTA CAAAACATTT GTTTGTGTAG AAACGGCTTA CGCTTCAGAA
ACGCAAAAAG TCACCAAAGA GAAACCTGCA CATCTGGCGC AATCCATTCG CGTTGCGAAA
CGTTAA
 
Protein sequence
MKLKDCVMIK KIFALPVIEQ ISPVLSRRKL DELDLIVVDH PQVKASFALQ GAHLLSWKPA 
GEEEVLWLSN NTPFKNGVAI RGGVPVCWPW FGPAAQQGLP AHGFARNLPW TLKSHHEDAD
GVALTFELTQ SEETKKFCPH DFTLLAHFRV GKTCEIDLES HGEFETTSAL HTYFNVGDIA
KVSVSGLGDR FIDKVNDAKE DVLTDGIQTF PDRTDRVYLN PQDCSVINDE ALNRIIAVGH
QHHLNVVGWN PGPALSISMG DMPDDGYKTF VCVETAYASE TQKVTKEKPA HLAQSIRVAK
R