| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E2026 |
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| Symbol | gapA |
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| ID | 6273161 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 1845002 |
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| End bp | 1845997 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641726074 |
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| Product | gIyceraldehyde-3-phosphate dehydrogenase (phosphorylating) |
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| Protein accession | YP_001880568 |
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| Protein GI | 187732440 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase |
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| TIGRFAM ID | [TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00000807541 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACTATCA AAGTAGGTAT CAACGGTTTT GGCCGTATCG GTCGCATTGT TTTCCGTGCT
GCTCAGAAAC GTTCTGACAT CGAGATCGTT GCAATCAACG ACCTGTTAGA CGCTGATTAC
ATGGCATACA TGCTGAAATA TGACTCCACT CACGGCCGTT TCGACGGTAC CGTTGAAGTG
AAAGACGGTC ATCTGATCGT TAACGGTAAA AAAATCCGTG TTACCGCTGA ACGTGATCCG
GCTAACCTGA AATGGGACGA AGTTGGTGTT GACGTTGTCG CTGAAGCAAC TGGTCTGTTC
CTGACTGACG AAACTGCTCG TAAACACATC ACCGCTGGTG CGAAGAAAGT GGTTATGACT
GGTCCGTCTA AAGACAACAC TCCGATGTTC GTTAAAGGCG CTAACTTCGA CAAATATGCT
GGCCAGGACA TCGTTTCCAA CGCTTCCTGC ACCACCAACT GCCTGGCTCC GCTGGCTAAA
GTTATCAACG ATAACTTCGG CATCATCGAA GGTCTGATGA CCACCGTTCA CGCTACTACC
GCTACTCAGA AAACCGTTGA TGGCCCGTCT CACAAAGACT GGCGCGGCGG CCGCGGCGCT
TCCCAGAACA TCATCCCGTC CTCTACCGGT GCTGCTAAAG CTGTAGGTAA AGTACTGCCA
GAACTGAATG GCAAACTGAC TGGTATGGCG TTCCGCGTTC CGACCCCGAA CGTATCCGTA
GTTGACCTGA CCGTTCGTCT GGAAAAAGCT GCAACTTACG AGCAGATCAA AGCTGCCGTT
AAAGCCGCTG CTGAAGGCGA AATGAAAGGC GTTCTGGGCT ACACCGAAGA TGACGTAGTA
TCTACCGATT TCAACGGCGA AGTTTGCACT TCCGTGTTCG ATGCTAAAGC TGGTATCGCT
CTGAACGACA ACTTCGTGAA ACTGGTATCC TGGTACGACA ACGAAACCGG TTACTCCAAC
AAAGTTCTGG ACCTGATCGC TCACATCTCC AAATAA
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| Protein sequence | MTIKVGINGF GRIGRIVFRA AQKRSDIEIV AINDLLDADY MAYMLKYDST HGRFDGTVEV
KDGHLIVNGK KIRVTAERDP ANLKWDEVGV DVVAEATGLF LTDETARKHI TAGAKKVVMT
GPSKDNTPMF VKGANFDKYA GQDIVSNASC TTNCLAPLAK VINDNFGIIE GLMTTVHATT
ATQKTVDGPS HKDWRGGRGA SQNIIPSSTG AAKAVGKVLP ELNGKLTGMA FRVPTPNVSV
VDLTVRLEKA ATYEQIKAAV KAAAEGEMKG VLGYTEDDVV STDFNGEVCT SVFDAKAGIA
LNDNFVKLVS WYDNETGYSN KVLDLIAHIS K
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