Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E2014 |
Symbol | gdhA |
ID | 6273027 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 1832840 |
End bp | 1834183 |
Gene Length | 1344 bp |
Protein Length | 447 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641726063 |
Product | glutamate dehydrogenase |
Protein accession | YP_001880557 |
Protein GI | 187733792 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0334] Glutamate dehydrogenase/leucine dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATCAGA CATATTCTCT GGAGTCATTC CTCAACCATG TCCAAAAGCG CGACCCGAAT CAAACCGAGT TCGCGCAAGC CGTTCGTGAA GTAATGACCA CACTCTGGCC TTTTCTTGAA CAAAATCCAA AATATCGCCA GATGTCATTA CTGGAGCGTC TGGTTGAACC GGAGCGCGTG ATCCAGTTTC GCGTGGTATG GGTTGATGAT CGCAACCAGG TACAGGTCAA CCGTGCATGG CGTGTGCAGT TCAGCTCAGC CATCGGCCCG TACAAAGGCG GTATGCGCTT CCATCCGTCA GTTAACCTCT CCATTCTCAA ATTCCTCGGC TTCGAACAAA CCTTCAAAAA TGCCCTGACT ACCCTGCCGA TGGGCGGTGG TAAAGGCGGT AGCGATTTTG ACCCGAAAGG TAAAAGCGAA AGCGAAGTGA TGCGTTTCTG CCAGGCGCTG ATGACCGAGC TTTATCGTCA TCTGGGCGCG GATACCGACG TTCCGGCAGG TGATATCGGC GTTGGTGGTC GTGAAGTCGG CTTTATGGCG GGGATGATGA AAAAGCTCTC CAACAATACC GCCTGCGTCT TCACCGGTAA GGGCCTTTCA TTTGGCGGTA GTCTTATTCG CCCGGAAGCT ACCGGCTACG GTCTGGTTTA TTTCACAGAA GCAATGTTAA AACGCCACGG TATGGGTTTT GAAGGGATGC GCGTTTCCGT TTCTGGCTCC GGCAACGTCG CCCAGTACGC TATCGAAAAA GCGATGGAAT TTGGTGCTCG TGTGATCACT GCGTCAGACT CCAGCGGCAC TGTAGTTGAT GAAAGCGGAT TCACGAAAGA GAAACTGGCA CGTCTTATCG AAATCAAAGC CAGCCGCGAT GGTCGAGTGG CAGATTACGC CAAAGAATTT GGTCTGGTCT ATCTCGAAGG CCAACAGCCG TGGTCTGTAC CGGTTGATAT CGCCCTGCCT TGCGCCACCC AGAACGAACT GGATGTTGAC GCCGCGCATC AGCTTATCGC CAATGGCGTT AAAGCCGTCG CCGAAGGGGC AAATATGCCG ACCACCATCG AAGCGACTGA ACTGTTCCAG CAGGCAGGCG TACTGTTTGC ACCGGGTAAA GCGGCTAATG CTGGCGGTGT AGCAACGTCA GGCCTTGAAA TGGCGCAAAA CGCTGCGCGC CTGGGCTGGA AAGCCGAGAA AGTTGACGCA CGTTTGCATC ACATCATGCT GGATATCCAC CATGCCTGTG TTGAGCATGG TGGTGAAGGT GAGCAAACCA ACTACGTGCA GGGCGCGAAC ATTGCCGGTT TTGTGAAGGT TGCCGATGCG ATGCTGGCGC AGGGTGTGAT TTAA
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Protein sequence | MDQTYSLESF LNHVQKRDPN QTEFAQAVRE VMTTLWPFLE QNPKYRQMSL LERLVEPERV IQFRVVWVDD RNQVQVNRAW RVQFSSAIGP YKGGMRFHPS VNLSILKFLG FEQTFKNALT TLPMGGGKGG SDFDPKGKSE SEVMRFCQAL MTELYRHLGA DTDVPAGDIG VGGREVGFMA GMMKKLSNNT ACVFTGKGLS FGGSLIRPEA TGYGLVYFTE AMLKRHGMGF EGMRVSVSGS GNVAQYAIEK AMEFGARVIT ASDSSGTVVD ESGFTKEKLA RLIEIKASRD GRVADYAKEF GLVYLEGQQP WSVPVDIALP CATQNELDVD AAHQLIANGV KAVAEGANMP TTIEATELFQ QAGVLFAPGK AANAGGVATS GLEMAQNAAR LGWKAEKVDA RLHHIMLDIH HACVEHGGEG EQTNYVQGAN IAGFVKVADA MLAQGVI
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