Gene SbBS512_E2001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E2001 
Symbol 
ID6269837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand+ 
Start bp1824140 
End bp1824847 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content52% 
IMG OID641726053 
Producthypothetical protein 
Protein accessionYP_001880547 
Protein GI187731107 
COG category[S] Function unknown 
COG ID[COG0398] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.637644 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAAGA TGCAATCGCG TAAAATCTGG TACTACCGTA TAACCCTCAT CATCCTGTTG 
TTCGCTATGC TGCTCGCATG GGCGCTGCTT CCCGGCGTCC ATGAGTTTAT CAATCGCAGC 
GTTGCGGCGT TTGCCGCCGT GGACCAACAG GGTATAGAAC GCTTTATTCA GTCTTACGGC 
GCACTGGCGG CAGTTGTCTC GTTCTTGTTG ATGACTTTAC AGGCCATTGC TGCACCGCTA 
CCTGCGTTTT TGATCACCTT TGCCAATGCG TCGCTGTTTG GCGCGTTCTG GGGCGGCTTG 
CTGTCGTGGA CCAGTTCGAT GGCCGGCGCG GCGCTGTGCT TTTTTATCGC CAGAGTGATG 
GGCCGCGAAG TGGTGGAAAA ATTAACCGGC AAAACCGTGC TTGACAGTAT GGACGGCTTT 
TTCACTCGCT ACGGCAAACA CACCATCCTG GTCTGTCGGT TATTGCCTTT TGTCCCTTTC 
GATCCAATCA GCTATGCTGC CGGTCTGACT TCAATACGTT TTCGCTCGTT TTTTATCGCC 
ACCGGGCTTG GTCAATTACC GGCGACTATT GTTTATTCCT GGGCGGGCAG CATGTTAACA 
GGCGGTACTT TCTGGTTTGT CACCGGACTG TTTATTCTGT TTGCCCTGAC CGTGGTGATT 
TTTATGGCGA AGAAAATATG GCTTGAGCGC CAGAAGAGGA ATGACTGA
 
Protein sequence
MMKMQSRKIW YYRITLIILL FAMLLAWALL PGVHEFINRS VAAFAAVDQQ GIERFIQSYG 
ALAAVVSFLL MTLQAIAAPL PAFLITFANA SLFGAFWGGL LSWTSSMAGA ALCFFIARVM 
GREVVEKLTG KTVLDSMDGF FTRYGKHTIL VCRLLPFVPF DPISYAAGLT SIRFRSFFIA 
TGLGQLPATI VYSWAGSMLT GGTFWFVTGL FILFALTVVI FMAKKIWLER QKRND