| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E1995 |
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| Symbol | astC |
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| ID | 6269345 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | - |
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| Start bp | 1819317 |
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| End bp | 1820537 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641726048 |
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| Product | bifunctional succinylornithine transaminase/acetylornithine transaminase |
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| Protein accession | YP_001880542 |
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| Protein GI | 187733826 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4992] Ornithine/acetylornithine aminotransferase |
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| TIGRFAM ID | [TIGR00707] acetylornithine and succinylornithine aminotransferases
[TIGR03246] succinylornithine transaminase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTCAGC CAATTACGCG TGAAAACTTT GATGAATGGA TGATACCTGT TTACGCTCCG
GCACCCTTTA TACCGGTACG TGGCGAAGGT TCGCGCTTGT GGGATCAGCA GGGGAAAGAG
TATATCGACT TCGCGGGTGG CATTGCGGTG AACGCGCTGG GCCATGCGCA TCCGGAACTG
CGTGAAGCGC TGAACGAACA GGCGAGTAAG TTCTGGCATA CCGGCAACGG TTACACCAAC
GAGCCGGTAC TGCGACTGGC GAAAAAATTG ATCGACGCCA CGTTTGCCGA TCGCGTCTTC
TTTTGTAACT CCGGTGCGGA AGCCAACGAA GCGGCGCTAA AACTGGCGCG TAAATTCGCT
CACGACCGCT ACGGCAGCCA TAAGAGCGGT ATCATGGCGT TTAAAAATGC GTTTCATGGT
CGCACGCTGT TTACTGTCAG TGCGGGTGGG CAGCCAGCCT ATTCACAGGA TTTTGCGCCA
CTGCCACCAG ATATCCGTCA TGCTGCATAT AACGATATTA ACTCTGCCAG CGCGCTGATT
GACGACGCCA CCTGTGCGGT GATTGTCGAA CCCATCCAGG GGGAAGGCGG TGTGGTGCCA
GCCAGCAACG CGTTTTTACA AGGTCTGCGT GAATTGTGTG ACCGCCACAA TGCGCTGTTG
ATTTTTGATG AAGTACAAAC CGGCGTCGGG CGCACCGGGG AACTGTATGC CTATATGCAC
TACGGCGTGA CACCTGATCT GTTAACTACC GCCAAAGCGC TGGGCGGCGA TTTCCCGGTC
GGTGCGTTGT TAACAACCGA AGAGTGCGCC AGCGTGATGA CCGTTGGCAC TCATGGCACC
ACCTATGGCG GCAATCCGCT GGCCTCGGCG GTGGCGGGCA AAGTGCTGGA GCTCATCAAC
ACACCAGAGA TGCTTAATGG CGTTAAACAG CGTCACGACT GGTTTGTTGA GCGTCTTAAT
ACCATTAATC ACCGCTACGG TTTGTTCAGT GAAGTTCGCG GCTTAGGTTT GTTGATTGGC
TGTGTACTGA ATGCCGATTA CGCCGGACAA GCGAAACAGA TCTCTCAGGA GGCGGCGAAA
GCAGGCGTTA TGGTACTGAT TGCGGGTGGC AACGTGGTGC GTTTTGCGCC TGCGCTCAAT
GTCAGCGAAG AAGAGGTGAC GACCGGACTG GATCGCTTTG CAGCTGCTTG CGAACACTTT
GTTAGCCGAG GTTCATCATG A
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| Protein sequence | MSQPITRENF DEWMIPVYAP APFIPVRGEG SRLWDQQGKE YIDFAGGIAV NALGHAHPEL
REALNEQASK FWHTGNGYTN EPVLRLAKKL IDATFADRVF FCNSGAEANE AALKLARKFA
HDRYGSHKSG IMAFKNAFHG RTLFTVSAGG QPAYSQDFAP LPPDIRHAAY NDINSASALI
DDATCAVIVE PIQGEGGVVP ASNAFLQGLR ELCDRHNALL IFDEVQTGVG RTGELYAYMH
YGVTPDLLTT AKALGGDFPV GALLTTEECA SVMTVGTHGT TYGGNPLASA VAGKVLELIN
TPEMLNGVKQ RHDWFVERLN TINHRYGLFS EVRGLGLLIG CVLNADYAGQ AKQISQEAAK
AGVMVLIAGG NVVRFAPALN VSEEEVTTGL DRFAAACEHF VSRGSS
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