| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E1990 |
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| Symbol | astE |
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| ID | 6268901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | - |
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| Start bp | 1813060 |
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| End bp | 1814028 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641726043 |
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| Product | succinylglutamate desuccinylase |
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| Protein accession | YP_001880537 |
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| Protein GI | 187732853 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2988] Succinylglutamate desuccinylase |
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| TIGRFAM ID | [TIGR03242] succinylglutamate desuccinylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 0.920225 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAATT TTCTTGCTCT GACCTTAACG GGTAAAAAAC CGGTTATCAC CGAGCGAGAA
ATCAACGGCG TTCGCTGGCG CTGGCTGGGC GATGGTGTGC TGGAACTGAC GCCATTAACG
CCACCGCAAG GCGCGCTGGT GATTTCTGCG GGGATCCACG GTAATGAGAC GGCACCTGTG
GAAATGCTGG ACGCGTTGCT TGGCGCGATA TCTCACGGCG AGATCCCGTT ACGTTGGCGG
TTGCTGGTGA TCCTCGGGAA TCCTCCTGCG CTGAAGCAAG GGAAACGTTA TTGCCATAGC
GATATGAATC GAATGTTTGG CGGTCGTTGG CAGCTATTTG CTGAAAGCGG AGAAACCTGT
CGGGCGCGCG AACTGGAACA GTGCCTGGAA GATTTTTATG ACCAGGGCAA AGAATCTGTG
CGCTGGCACC TTGATCTACA TACCGCAATT CGTGGCTCCT TGCATCCGCA GTTCGGTGTA
TTACCGCAAC GCGACATTCC CTGGGACGAG AAATTTCTGA CGTGGCTGGG TGCGGCGGGG
CTGGAGGCGC TGGTGTTCCA TCAGGAACCT GGTGGTACGT TTACCCATTT CAGCGCCAGA
CATTTTGGCG CGCTGGCCTG TACGCTGGAA CTTGGCAAAG CGTTGCCCTT TGGGCAAAAC
GATCTTCGCC AGTTTGCAGT AACTGCCAGC GCAATTGCTG CGCTGCTATC TGGTGAGAGT
GTCGGTATCG TGAGAACACC GCCGCTCCGT TATCGGGTGG TTTCGCAAAT TACTCGCCAC
TCGCCGTCCT TCGAAATGCA TATGGCAAGT GACACGCTGA ATTTTATGCC GTTTGAGAAA
GGAACATTGC TGGCGCAGGA CGGAGAGGAA CGTTTTACCG TAACCCATGA TGTAGAGTAT
GTGTTATTCC CTAATCCGTT GGTAGCGTTG GGATTACGCG CGGGATTAAT GCTCGAAAAA
ATAAGCTAA
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| Protein sequence | MDNFLALTLT GKKPVITERE INGVRWRWLG DGVLELTPLT PPQGALVISA GIHGNETAPV
EMLDALLGAI SHGEIPLRWR LLVILGNPPA LKQGKRYCHS DMNRMFGGRW QLFAESGETC
RARELEQCLE DFYDQGKESV RWHLDLHTAI RGSLHPQFGV LPQRDIPWDE KFLTWLGAAG
LEALVFHQEP GGTFTHFSAR HFGALACTLE LGKALPFGQN DLRQFAVTAS AIAALLSGES
VGIVRTPPLR YRVVSQITRH SPSFEMHMAS DTLNFMPFEK GTLLAQDGEE RFTVTHDVEY
VLFPNPLVAL GLRAGLMLEK IS
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