Gene SbBS512_E1987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E1987 
Symbolspy 
ID6271615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp1811483 
End bp1811953 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content51% 
IMG OID641726041 
Productperiplasmic protein 
Protein accessionYP_001880535 
Protein GI187732495 
COG category[N] Cell motility
[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3678] P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.243751 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTAAAT TAACTGCACT GTTTGTTGCC TCTACCCTGG CTCTTGGCGC GGCTAACCTG 
GCCCATGCCG CAGCACCGGC TGACGCGAAG CCGATGATGC ACCACAAAGG CAAGTTCGGT
CCGCATCAGG ACATGATGTT CAAAGACCTG AACCTGACCG ACGCGCAGAA ACAGCAGATC
CGCGAAATCA TGAAAGGCCA GCGTGACCAG ATGAAACGTC CGCCGCTGGA AGAACGCCGC
GCAATGCATG ACATCATTGT CAGCGATACC TTCGATAAAG CAAAAGCTGA AGCGCAGATC
GCAAAAATGG AAGAACAGCG CAAAGCTAAC ATGCTGGCGC ACATGGAAAC CCAGAACAAA
ATTTACAACA TCCTGACGCC GGAACAGAAA AAGCAATTTA ATGCTAATTT TGAGAAGCGT
CTGACAGAAC GTCCAGCGGC AAAAGGTAAA ATGCCTGCAA CTGCTGAATA A
 
Protein sequence
MRKLTALFVA STLALGAANL AHAAAPADAK PMMHHKGKFG PHQDMMFKDL NLTDAQKQQI 
REIMKGQRDQ MKRPPLEERR AMHDIIVSDT FDKAKAEAQI AKMEEQRKAN MLAHMETQNK
IYNILTPEQK KQFNANFEKR LTERPAAKGK MPATAE