Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E1987 |
Symbol | spy |
ID | 6271615 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 1811483 |
End bp | 1811953 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641726041 |
Product | periplasmic protein |
Protein accession | YP_001880535 |
Protein GI | 187732495 |
COG category | [N] Cell motility [P] Inorganic ion transport and metabolism [T] Signal transduction mechanisms [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3678] P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.243751 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTAAAT TAACTGCACT GTTTGTTGCC TCTACCCTGG CTCTTGGCGC GGCTAACCTG GCCCATGCCG CAGCACCGGC TGACGCGAAG CCGATGATGC ACCACAAAGG CAAGTTCGGT CCGCATCAGG ACATGATGTT CAAAGACCTG AACCTGACCG ACGCGCAGAA ACAGCAGATC CGCGAAATCA TGAAAGGCCA GCGTGACCAG ATGAAACGTC CGCCGCTGGA AGAACGCCGC GCAATGCATG ACATCATTGT CAGCGATACC TTCGATAAAG CAAAAGCTGA AGCGCAGATC GCAAAAATGG AAGAACAGCG CAAAGCTAAC ATGCTGGCGC ACATGGAAAC CCAGAACAAA ATTTACAACA TCCTGACGCC GGAACAGAAA AAGCAATTTA ATGCTAATTT TGAGAAGCGT CTGACAGAAC GTCCAGCGGC AAAAGGTAAA ATGCCTGCAA CTGCTGAATA A
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Protein sequence | MRKLTALFVA STLALGAANL AHAAAPADAK PMMHHKGKFG PHQDMMFKDL NLTDAQKQQI REIMKGQRDQ MKRPPLEERR AMHDIIVSDT FDKAKAEAQI AKMEEQRKAN MLAHMETQNK IYNILTPEQK KQFNANFEKR LTERPAAKGK MPATAE
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