Gene SbBS512_E1960 details

Gene Information

• Locus tag: SbBS512_E1960
• Symbol: infC
• ID: 6268856
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: -
• Start bp: 1791828
• End bp: 1792262
• Gene Length: 435 bp
• Protein Length: 144 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 641726014
• Product: translation initiation factor IF-3
• Protein accession: YP_001880508
• Protein GI: 187732581
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0290] Translation initiation factor 3 (IF-3)
• TIGRFAM ID: [TIGR00168] translation initiation factor IF-3

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.0000000234201
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGTCTGA GAGAAGCTCT GGAGAAAGCA GAAGAAGCCG GAGTAGACTT AGTCGAGATC 
AGCCCTAACG CCGAGCCGCC GGTTTGTCGT ATAATGGATT ACGGCAAATT CCTCTATGAA 
AAGAGCAAGT CTTCTAAGGA ACAGAAGAAA AAGCAAAAAG TTATCCAGGT TAAGGAAATT 
AAATTCCGTC CTGGTACAGA TGAAGGCGAC TATCAGGTAA AACTCCGCAG CCTGATTCGC 
TTTCTCGAAG AGGGTGATAA AGCCAAAATC ACGCTGCGTT TCCGCGGTCG TGAGATGGCG 
CACCAGCAAA TCGGTATGGA AGTGCTTAAT CGCGTGAAAG ACGATTTGCA AGAACTGGCA 
GTGGTCGAAT CCTTCCCAAC GAAGATCGAA GGCCGCCAGA TGATCATGGT GCTCGCTCCT 
AAGAAGAAAC AGTAA 

 

Protein sequence

MSLREALEKA EEAGVDLVEI SPNAEPPVCR IMDYGKFLYE KSKSSKEQKK KQKVIQVKEI 
KFRPGTDEGD YQVKLRSLIR FLEEGDKAKI TLRFRGREMA HQQIGMEVLN RVKDDLQELA 
VVESFPTKIE GRQMIMVLAP KKKQ