Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E1953 |
Symbol | |
ID | 6272996 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 1785651 |
End bp | 1786847 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641726007 |
Product | transposase |
Protein accession | YP_001880501 |
Protein GI | 187732992 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3547] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGAAT CCAGCGATTA CGAATCCGTC CAGGTCTTTA TCGGCGTTGA TGTCGGTAAA GATACGCATC ACGCTGTTGC CATTAATCGT TCAGGTAAAC GCCTGTTCGA TAAAGCATTA CCCAACGACG AAAACAAACT CAGGTCGCTA ATATCTGACC TGAAACAACA TGGTCAGATA CTGCTGGTTG TTGATCAGCC AGCTACCATC GGTGCGTTAC CTGTCGCCGT TGCCCGCTCA GAAGGAGTCC TTGTCGGATA CCTCCCTGGA CTGGCCATGC GCCGCATAGC CGACTTACAC GCCGGTGAAG CTAAAACTGA TGCTCGTGAC GCTGCCATCA TTGCCGAAGC TGCCCGTACC CTACCTCACG CGCTACGCAC GCTGAAACTG GCTGACGAGC AAATCGCCGA ACTCTCCATG CTCTGCGGCT TCGATGATGA TCTTGCCGCA CAGACAACGC AGGCCAGCAA CCGTATCCGC GGCCTTCTGA CCCAGATACA TCCGGCACTG GAGCGCGTTC TCGGTCCGAG ACTTGAGCAC CCGGCGGTAC TCGATCTTCT CCAGCGATAT CCCTCACCAG AAAAACTCGC TTCGCTGGGT GAGAAGAAGC TGGCAGCCCA GCTCTGCAAA CTTGCGCCTC GTCTGGGTAA ACGCCTTGCA GCAGACATAG CTCAGGCACT GGCCGAACAA ACCGTCGTCG TTCCCGGCAC GAATGCCGCT GCCGTAGTAC TGCCACGTCT GGCACTCCAG CTCATCACGC TGCGTAAGCA AAGAGACGAG GTGGCGCTTG AGGTAGAACT GCGAGTTCTT GCTCACCCTC TTTACCCGGT CCTGACCAGT ATGCCCGGAG TCGGTGTCAG GACCGCAGCC AGACTCCTCA CCGAGGTCGC CTGCCGCGCC TTCGCCTCTG CCGCACATCT CGCTGCTTAT GCTGGCCTTG CGCCGGTAAC TCGGCGATCC GGCTCGTCAA TACGCGGTGA GCATCCCTCG CGACGGGGTA ATAAAGCTCT CAAACGGGCG TTGTTCCTGT CGGCCTTCGC CGCGCTCAGG GATCCGCTCT CCAGGGCTTA CTACACCCGC AAAATGAGTC AGGGAAAACG ACACAATCAG GCGCTTATCG CCCTGGCGAG ACGACGCTGC GACGTTCTGT TCGCCATGAT GCGCGACGGG ACTTTTTATA CCCCGCAGGG GTCATAA
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Protein sequence | MTESSDYESV QVFIGVDVGK DTHHAVAINR SGKRLFDKAL PNDENKLRSL ISDLKQHGQI LLVVDQPATI GALPVAVARS EGVLVGYLPG LAMRRIADLH AGEAKTDARD AAIIAEAART LPHALRTLKL ADEQIAELSM LCGFDDDLAA QTTQASNRIR GLLTQIHPAL ERVLGPRLEH PAVLDLLQRY PSPEKLASLG EKKLAAQLCK LAPRLGKRLA ADIAQALAEQ TVVVPGTNAA AVVLPRLALQ LITLRKQRDE VALEVELRVL AHPLYPVLTS MPGVGVRTAA RLLTEVACRA FASAAHLAAY AGLAPVTRRS GSSIRGEHPS RRGNKALKRA LFLSAFAALR DPLSRAYYTR KMSQGKRHNQ ALIALARRRC DVLFAMMRDG TFYTPQGS
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