Gene SbBS512_E1941 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E1941 
Symbol 
ID6273266 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp1774417 
End bp1776129 
Gene Length1713 bp 
Protein Length570 aa 
Translation table11 
GC content52% 
IMG OID641725999 
ProductgpH 
Protein accessionYP_001880493 
Protein GI187733675 
COG category[R] General function prediction only 
COG ID[COG5301] Phage-related tail fibre protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTACCA CAACACGAAA ATTTAAAACC ATTATCACCG ATACGGGTGC AAAAAAATTA 
GCTCAGGTAG CCGCGCCAGA TGGTAAGCCT GTCCGCCTGA CTCATATGGC CGTGGGCGAC
GGTGGCGGCA CGTTGCCCAC ACCAGACAGT AAGCAGACCC GTCTGGTGCA TGAGGTGTGG
CGACATACTG TTAATCGCGT CATCCTGGAC GCAACACATC AGAACCGCAT TATTGCGGAG
CTGGTTATTC CTCCTGAAAC GGGCGGATTC TGGATCCGGG AAATTGGTGT ATTTGATGAG
CACGGCGATT TAATCGCGGT GGGAAATACT GCCGAAAGTT ACAAGCCAGC CGTTGCCGAA
GGGTCCGGTC GTGCACAAAC ATTTCGCACC ATTCTGACCG TATCCAGCAC TGCCACCGTG
GCGCTTACCG TGGACAACAC CATGGTGATG GCCACAGTGG ATTACGTGGA TGACAAACTG
AAAGAGCATG AACAGTCACG ACGTCACCCG GACGCCTCGC TGACCGCAAA AGGCTTTGTT
CAACTCAGTA GCGCCACTAA CAGCGTGTCT GAAACGCAGG CTGCAACGCC GAAAGCAGTA
AAGGCCGCGT ATGATCTTGC TAACGGTAAA TATACTGCGC AGGATGCCAG CACGACGCGA
AAAGGCCTTG TCCAGCTCAG TAGCGCCACC AACAGCACGT CTGAAACGCA GGCTGCAACG
CCGAAAGCAG TAAAGGCCGC GTATGACCTT GCTAACGCAA AATATACCGC TCAGGACGCC
ACGACGGCAC AAAAAGGGAT AGTCCAGCTC AGTAGTGCCA CCAACAGCAC GTCTGAAACA
CTGGCCGCGA CATCGAAAGC GGTTAAGGCG GTAATGGATG AAACGAACAA GAAAGCGCCC
TTAAACAGTC CTGCGCTGAC CGGAACGCCA ACAACGCCAA CTGCGCGACA GGGAACGAAT
AATACCCAAA TCGCAAGCAC GGCTTTCGTT ATGGCTGCGA TTGCCGCCCT TGTAGATTCG
TCACCTGACG CACTGAATAC GCTGAACGAG TTAGCGGCGG CGCTGGGAAA CGACCCGAAT
TTTGCGACCA CCATGACTAA CGCGCTTGCG GGTAAGCAAC CGAAAGATGC CACCCTGACG
GCGCTGGCCG GGCTTGCTAC TGCGGCAGAC AGGTTTCCGT ATTTTACGGG GAATGATGTC
GCCAGCCTGG CAACCCTGAC AAAAGTCGGG CGGGATATTC TTGCGAAATC GACCGTTGCT
GCCGTTATCG AATACCTCGG TTTACGAGAA CTCGGCACAA GCGGGGAGAA AATACCGTTA
CTCAGTACAG CGAATACCTG GACCAATCGA CAAACATTCA GCGGTGGCCT TTCTGGGGAA
CTGTCCGGCA ATGCCGCTAC TGCAACAAAG CTGAAAACAG CACGAAAAAT TGCTGGAGTT
GGTTTTGATG GTTCTAGCGA TATTTCAATT AGTGCCAAAA ATGTCAATGC ATTTGCACTC
CGACAAACAG GTAATACTGT TAATGGTGAT ACATCCATTG GATGGAATTG GGATAGTAGT
GCATATAACG CCCTGATTGG TGGTGCATCT GCATTAATTC TTCACTTTAA TATAAATGCT
GGTAGCTGTC CTGCCGTACA ATTCCGTGTG AATTATAAAA ATGGTGGCAT TTCCTACAGG
TCGGCTCATG ATGGTTATGG GGTTGAATGG TGA
 
Protein sequence
MSTTTRKFKT IITDTGAKKL AQVAAPDGKP VRLTHMAVGD GGGTLPTPDS KQTRLVHEVW 
RHTVNRVILD ATHQNRIIAE LVIPPETGGF WIREIGVFDE HGDLIAVGNT AESYKPAVAE
GSGRAQTFRT ILTVSSTATV ALTVDNTMVM ATVDYVDDKL KEHEQSRRHP DASLTAKGFV
QLSSATNSVS ETQAATPKAV KAAYDLANGK YTAQDASTTR KGLVQLSSAT NSTSETQAAT
PKAVKAAYDL ANAKYTAQDA TTAQKGIVQL SSATNSTSET LAATSKAVKA VMDETNKKAP
LNSPALTGTP TTPTARQGTN NTQIASTAFV MAAIAALVDS SPDALNTLNE LAAALGNDPN
FATTMTNALA GKQPKDATLT ALAGLATAAD RFPYFTGNDV ASLATLTKVG RDILAKSTVA
AVIEYLGLRE LGTSGEKIPL LSTANTWTNR QTFSGGLSGE LSGNAATATK LKTARKIAGV
GFDGSSDISI SAKNVNAFAL RQTGNTVNGD TSIGWNWDSS AYNALIGGAS ALILHFNINA
GSCPAVQFRV NYKNGGISYR SAHDGYGVEW